RNA–Protein interactions for RNA: ENSMUST00000068584.6

Cd48-202, Transcript of CD48 antigen, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cd48, Length 1,186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48-202ENSMUST00000068584 Tcf3P15806 651 aa13.85□□□□□ -0.19
Cd48-202ENSMUST00000068584 Rhox8Q6VSS7 320 aa13.82□□□□□ -0.2
Cd48-202ENSMUST00000068584 Znf710Q3U288 666 aa13.74□□□□□ -0.21
Cd48-202ENSMUST00000068584 Cc2d2aQ8CFW7 1633 aa13.74□□□□□ -0.21
Cd48-202ENSMUST00000068584 Zcchc6Q5BLK4 1491 aaKnown RBP13.7□□□□□ -0.22
Cd48-202ENSMUST00000068584 Atad2bE9Q166 1460 aaKnown RBP13.69□□□□□ -0.22
Cd48-202ENSMUST00000068584 Baz1aO88379 1555 aa13.66□□□□□ -0.22
Cd48-202ENSMUST00000068584 CrebzfQ91ZR3 358 aa13.65□□□□□ -0.22
Cd48-202ENSMUST00000068584 TMEM121BQ99MX7 572 aa13.62□□□□□ -0.23
Cd48-202ENSMUST00000068584 Kiaa1522A2A7S8 1013 aa13.61□□□□□ -0.23
Cd48-202ENSMUST00000068584 Ercc6F8VPZ5 1481 aa13.57□□□□□ -0.24
Cd48-202ENSMUST00000068584 Cecr2E9Q2Z1 1453 aa13.56□□□□□ -0.24
Cd48-202ENSMUST00000068584 Smarca2Q6DIC0 1577 aa13.54□□□□□ -0.24
Cd48-202ENSMUST00000068584 Crybg2B7ZCC2 1516 aa13.53□□□□□ -0.24
Cd48-202ENSMUST00000068584 PygbQ8CI94 843 aaKnown RBP13.52□□□□□ -0.25
Cd48-202ENSMUST00000068584 Fam135aQ6NS59 1506 aa13.48□□□□□ -0.25
Cd48-202ENSMUST00000068584 Iqgap2Q3UQ44 1575 aa13.47□□□□□ -0.25
Cd48-202ENSMUST00000068584 Smarca4Q3TKT4 1613 aaKnown RBP13.46□□□□□ -0.25
Cd48-202ENSMUST00000068584 OsbpQ3B7Z2 805 aa13.46□□□□□ -0.25
Cd48-202ENSMUST00000068584 Frmpd1A2AKB4 1549 aa13.44□□□□□ -0.26
Cd48-202ENSMUST00000068584 Zbtb7bQ64321 544 aa13.44□□□□□ -0.26
Cd48-202ENSMUST00000068584 Ubl4bQ9CQ84 188 aa13.44□□□□□ -0.26
Cd48-202ENSMUST00000068584 Lhx8O35652 367 aa13.43□□□□□ -0.26
Cd48-202ENSMUST00000068584 Dmrta2A2A9A2 531 aa13.4□□□□□ -0.26
Cd48-202ENSMUST00000068584 Pde4dQ01063 747 aa13.4□□□□□ -0.26
Cd48-202ENSMUST00000068584 MycnP03966 462 aaKnown RBP13.39□□□□□ -0.27
Cd48-202ENSMUST00000068584 Dnajc5P60904 198 aa13.38□□□□□ -0.27
Cd48-202ENSMUST00000068584 Wdr62Q3U3T8 1523 aa13.38□□□□□ -0.27
Cd48-202ENSMUST00000068584 Phldb1Q6PDH0 1371 aaKnown RBP13.37□□□□□ -0.27
Cd48-202ENSMUST00000068584 Ccdc180J3QNE4 1664 aa13.36□□□□□ -0.27
Cd48-202ENSMUST00000068584 Repin1Q5U4E2 545 aa13.35□□□□□ -0.27
Cd48-202ENSMUST00000068584 Rnf225Q9D7D1 332 aa13.35□□□□□ -0.27
Cd48-202ENSMUST00000068584 Atad2Q8CDM1 1040 aa13.34□□□□□ -0.27
Cd48-202ENSMUST00000068584 Hdac5Q9Z2V6 1113 aa13.34□□□□□ -0.27
Cd48-202ENSMUST00000068584 Pdap1Q3UHX2 181 aaKnown RBP13.31□□□□□ -0.28
Cd48-202ENSMUST00000068584 Gm45233A0A0N4SVE0 221 aa13.3□□□□□ -0.28
Cd48-202ENSMUST00000068584 Krtap4-1Q3UUY3 169 aa13.29□□□□□ -0.28
Cd48-202ENSMUST00000068584 Znf516Q7TSH3 1157 aa13.27□□□□□ -0.29
Cd48-202ENSMUST00000068584 Fam117bQ3U3E2 584 aa13.26□□□□□ -0.29
Cd48-202ENSMUST00000068584 Dcbld2Q91ZV3 769 aa13.26□□□□□ -0.29
Cd48-202ENSMUST00000068584 Ube2uB1AUC4 352 aa13.24□□□□□ -0.29
Cd48-202ENSMUST00000068584 Unc13aQ4KUS2 1712 aa13.24□□□□□ -0.29
Cd48-202ENSMUST00000068584 ZxdbA2CE44 873 aa13.23□□□□□ -0.29
Cd48-202ENSMUST00000068584 Gm13697A2AK42 830 aa13.21□□□□□ -0.29
Cd48-202ENSMUST00000068584 Mrc2Q64449 1479 aa13.21□□□□□ -0.3
Cd48-202ENSMUST00000068584 Ndufv2Q9D6J6 248 aa13.17□□□□□ -0.3
Cd48-202ENSMUST00000068584 Arhgef1Q61210 920 aaKnown RBP13.13□□□□□ -0.31
Cd48-202ENSMUST00000068584 Znf579Q80VM4 562 aa13.11□□□□□ -0.31
Cd48-202ENSMUST00000068584 Ccdc136Q3TVA9 1136 aa13.07□□□□□ -0.32
Cd48-202ENSMUST00000068584 Tulp1Q9Z273 543 aa13.07□□□□□ -0.32
Cd48-202ENSMUST00000068584 Prim1P20664 417 aa13.06□□□□□ -0.32
Cd48-202ENSMUST00000068584 Kank4Q6P9J5 1016 aa13.05□□□□□ -0.32
Cd48-202ENSMUST00000068584 Synj1Q8CHC4 1574 aa13.05□□□□□ -0.32
Cd48-202ENSMUST00000068584 CftrP26361 1476 aa13.04□□□□□ -0.32
Cd48-202ENSMUST00000068584 Bclaf1Q8K019 919 aaKnown RBP13.04□□□□□ -0.32
Cd48-202ENSMUST00000068584 Lrriq1Q0P5X1 1673 aa12.99□□□□□ -0.33
Cd48-202ENSMUST00000068584 Chrm1P12657 460 aa12.98□□□□□ -0.33
Cd48-202ENSMUST00000068584 Pak3Q61036 559 aa12.98□□□□□ -0.33
Cd48-202ENSMUST00000068584 Baz1bQ9Z277 1479 aa12.97□□□□□ -0.33
Cd48-202ENSMUST00000068584 C1qbpO35658 278 aa12.96□□□□□ -0.33
Cd48-202ENSMUST00000068584 St18Q80TY4 1045 aa12.96□□□□□ -0.33
Cd48-202ENSMUST00000068584 Fam181bQ80VF6 417 aa12.95□□□□□ -0.34
Cd48-202ENSMUST00000068584 Cux2P70298 1426 aa12.95□□□□□ -0.34
Cd48-202ENSMUST00000068584 Esf1Q3V1V3 845 aaKnown RBP12.94□□□□□ -0.34
Cd48-202ENSMUST00000068584 Jph4Q80WT0 628 aa12.94□□□□□ -0.34
Cd48-202ENSMUST00000068584 Cttnbp2B9EJA2 1648 aa12.92□□□□□ -0.34
Cd48-202ENSMUST00000068584 Kif15Q6P9L6 1387 aa12.91□□□□□ -0.34
Cd48-202ENSMUST00000068584 Spock2Q9ER58 423 aa12.9□□□□□ -0.34
Cd48-202ENSMUST00000068584 Kif21aQ9QXL2 1672 aa12.89□□□□□ -0.35
Cd48-202ENSMUST00000068584 Rsf1E9PWW9 1441 aaKnown RBP12.86□□□□□ -0.35
Cd48-202ENSMUST00000068584 Pcdhb17Q91VD8 799 aa12.84□□□□□ -0.35
Cd48-202ENSMUST00000068584 Brd4Q9ESU6 1400 aaKnown RBP12.83□□□□□ -0.36
Cd48-202ENSMUST00000068584 Npm1Q61937 292 aaKnown RBP12.81□□□□□ -0.36
Cd48-202ENSMUST00000068584 Il27Q8K3I6 234 aa12.81□□□□□ -0.36
Cd48-202ENSMUST00000068584 Hmx1O70218 332 aa12.78□□□□□ -0.36
Cd48-202ENSMUST00000068584 Pelp1Q9DBD5 1123 aaKnown RBP12.77□□□□□ -0.37
Cd48-202ENSMUST00000068584 Axin1O35625 863 aa12.75□□□□□ -0.37
Cd48-202ENSMUST00000068584 Ecm2Q5FW85 670 aa12.75□□□□□ -0.37
Cd48-202ENSMUST00000068584 Ferd3lQ923Z4 168 aa12.75□□□□□ -0.37
Cd48-202ENSMUST00000068584 Scarf1Q5ND28 820 aa12.73□□□□□ -0.37
Cd48-202ENSMUST00000068584 Fndc3aQ8BX90 1198 aa12.73□□□□□ -0.37
Cd48-202ENSMUST00000068584 EdaraddQ8VHX2 208 aa12.73□□□□□ -0.37
Cd48-202ENSMUST00000068584 Col17a1Q07563 1470 aa12.72□□□□□ -0.37
Cd48-202ENSMUST00000068584 Evi5P97366 809 aa12.72□□□□□ -0.37
Cd48-202ENSMUST00000068584 Urb2E9Q7L1 1524 aaKnown RBP12.72□□□□□ -0.37
Cd48-202ENSMUST00000068584 Dkk1O54908 272 aa12.71□□□□□ -0.37
Cd48-202ENSMUST00000068584 Ppp6r1Q7TSI3 856 aa12.71□□□□□ -0.37
Cd48-202ENSMUST00000068584 Eif4g3Q80XI3 1579 aaKnown RBP12.71□□□□□ -0.37
Cd48-202ENSMUST00000068584 Shroom2A2ALU4 1481 aa12.71□□□□□ -0.38
Cd48-202ENSMUST00000068584 Plb1Q3TTY0 1478 aa12.71□□□□□ -0.38
Cd48-202ENSMUST00000068584 Pabpn1Q8CCS6 302 aaKnown RBP12.69□□□□□ -0.38
Cd48-202ENSMUST00000068584 Msh5Q9QUM7 833 aa12.68□□□□□ -0.38
Cd48-202ENSMUST00000068584 Lamc3Q9R0B6 1581 aa12.66□□□□□ -0.38
Cd48-202ENSMUST00000068584 E9Q0B3 247 aa12.65□□□□□ -0.38
Cd48-202ENSMUST00000068584 Dhx29Q6PGC1 1365 aaKnown RBP12.65□□□□□ -0.38
Cd48-202ENSMUST00000068584 Rtl1Q7M732 1744 aa12.65□□□□□ -0.38
Cd48-202ENSMUST00000068584 Lce6aD3YV94 81 aa12.64□□□□□ -0.39
Cd48-202ENSMUST00000068584 Pcdh10E9PXQ7 1057 aa12.64□□□□□ -0.39
Cd48-202ENSMUST00000068584 Cep164Q5DU05 1446 aa12.63□□□□□ -0.39
Cd48-202ENSMUST00000068584 Actn4P57780 912 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms