RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 AqrQ8CFQ3 1481 aaKnown RBP20.12■□□□□ 0.81
Ccdc71-201ENSMUST00000061209 Cux1P53564 1515 aa20.1■□□□□ 0.81
Ccdc71-201ENSMUST00000061209 EprsQ8CGC7 1512 aaKnown RBP20.09■□□□□ 0.81
Ccdc71-201ENSMUST00000061209 Arhgap27A2AB59 869 aa20.07■□□□□ 0.8
Ccdc71-201ENSMUST00000061209 Nup160Q9Z0W3 1402 aaKnown RBP20.07■□□□□ 0.8
Ccdc71-201ENSMUST00000061209 Arap1Q4LDD4 1452 aa20.05■□□□□ 0.8
Ccdc71-201ENSMUST00000061209 Lmod2Q3UHZ5 550 aa20.05■□□□□ 0.8
Ccdc71-201ENSMUST00000061209 Rpap1Q80TE0 1409 aa20.05■□□□□ 0.8
Ccdc71-201ENSMUST00000061209 Cc2d2bA0A286YDU8 1405 aa20.01■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 Aebp1Q640N1 1128 aa20.01■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 CadpsQ80TJ1 1355 aa20.01■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 Ankrd26Q811D2 1581 aa20.01■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 Fyco1Q8VDC1 1437 aa20■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 Gm7298A0A0N4SVU1 1476 aa19.96■□□□□ 0.79
Ccdc71-201ENSMUST00000061209 PxdnQ3UQ28 1475 aa19.95■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Setd1bQ8CFT2 1985 aa19.95■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 BlmO88700 1416 aa19.94■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Eif4g3Q80XI3 1579 aaKnown RBP19.93■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 WizO88286 1684 aaKnown RBP19.93■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Polr1aO35134 1717 aaKnown RBP19.93■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Acin1Q9JIX8 1338 aaKnown RBP19.93■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Rusc2Q80U22 1514 aa19.92■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Arhgef5E9Q7D5 1581 aa19.9■□□□□ 0.78
Ccdc71-201ENSMUST00000061209 Pbrm1Q8BSQ9 1634 aaKnown RBP19.87■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Pcf11G3X9Z4 1553 aa19.87■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 WrnO09053 1401 aa19.86■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Fkbp15Q6P9Q6 1216 aaKnown RBP19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 TchhA0A0B4J1F9 1599 aa19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Mier1Q5UAK0 511 aa19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Adamts12Q811B3 1600 aa19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 AknaQ80VW7 1404 aa19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Naip1Q9QWK5 1403 aa19.85■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 CntlnA2AM05 1397 aa19.83■□□□□ 0.77
Ccdc71-201ENSMUST00000061209 Soga1E1U8D0 1418 aa19.82■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Gpatch8A2A6A1 1505 aa19.82■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Erich3F6QRE9 1637 aa19.81■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Pelp1Q9DBD5 1123 aaKnown RBP19.81■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Kif27Q7M6Z4 1394 aa19.8■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Abca16E9PWJ7 1678 aa19.78■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Fgd6Q69ZL1 1399 aa19.77■□□□□ 0.76
Ccdc71-201ENSMUST00000061209 Tiam1Q60610 1591 aa19.76■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Lmo7E9PYF4 1699 aaKnown RBP19.76■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Abcc2Q8VI47 1543 aa19.75■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Abca5Q8K448 1642 aa19.74■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Slx4Q6P1D7 1565 aa19.74■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Neo1P97798 1493 aa19.72■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Shroom2A2ALU4 1481 aa19.71■□□□□ 0.75
Ccdc71-201ENSMUST00000061209 Jph4Q80WT0 628 aa19.68■□□□□ 0.74
Ccdc71-201ENSMUST00000061209 Gm1043A0A140LJC2 1431 aa19.65■□□□□ 0.74
Ccdc71-201ENSMUST00000061209 Ifnlr1Q8CGK5 535 aa19.65■□□□□ 0.74
Ccdc71-201ENSMUST00000061209 Arhgap31A6X8Z5 1425 aa19.63■□□□□ 0.73
Ccdc71-201ENSMUST00000061209 Fam50aQ9WV03 339 aaKnown RBP19.63■□□□□ 0.73
Ccdc71-201ENSMUST00000061209 Pabpn1Q8CCS6 302 aaKnown RBP19.59■□□□□ 0.73
Ccdc71-201ENSMUST00000061209 Rpgrip1Q9EPQ2 1331 aa19.59■□□□□ 0.73
Ccdc71-201ENSMUST00000061209 Dnmt1P13864 1620 aaKnown RBP19.58■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 BC005561E9Q5E2 1589 aa19.57■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 Map3k4O08648 1597 aa19.57■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 Ccnb3Q810T2 1396 aa19.55■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 Gm14025A2AP89 1413 aa19.55■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 Ncoa3O09000 1398 aa19.54■□□□□ 0.72
Ccdc71-201ENSMUST00000061209 Abcc1O35379 1528 aa19.51■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Mug1P28665 1476 aa19.49■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Arhgef12Q8R4H2 1543 aaKnown RBP19.49■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Peg3Q3URU2 1571 aa19.49■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Chic2Q9D9G3 165 aa19.49■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Rapgef6Q5NCJ1 1609 aa19.48■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Ncapd3Q6ZQK0 1506 aa19.48■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 3425401B19RikD3Z1D3 1412 aa19.47■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Ccdc141E9Q8Q6 1531 aa19.47■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 NexmifQ5DTT1 1515 aa19.46■□□□□ 0.71
Ccdc71-201ENSMUST00000061209 Ncoa2Q61026 1462 aa19.43■□□□□ 0.7
Ccdc71-201ENSMUST00000061209 Ythdc2B2RR83 1445 aaKnown RBP19.43■□□□□ 0.7
Ccdc71-201ENSMUST00000061209 Magi1Q6RHR9 1471 aa19.42■□□□□ 0.7
Ccdc71-201ENSMUST00000061209 Fam163aQ8CAA5 168 aa19.39■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Ube2uB1AUC4 352 aa19.39■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Zcchc11B2RX14 1644 aaKnown RBP19.38■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Arhgef11Q68FM7 1552 aa19.37■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 NefmP08553 848 aa19.37■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Lmtk2Q3TYD6 1471 aa19.36■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Arid3cA6PWV5 409 aa19.36■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Dhx57Q6P5D3 1388 aaKnown RBP19.35■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Mroh2aD3Z750 1679 aa19.34■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Gapvd1Q6PAR5 1458 aa19.34■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Eid3Q3V124 375 aa19.33■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Prex2Q3LAC4 1598 aa19.33■□□□□ 0.69
Ccdc71-201ENSMUST00000061209 Cabp1Q9JLK7 227 aa19.31■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 PtprtQ99M80 1454 aa19.3■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 A2mQ6GQT1 1474 aa19.3■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Chd1P40201 1711 aa19.3■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Tdrd9Q14BI7 1383 aa19.3■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Rrbp1Q99PL5 1605 aaKnown RBP19.3■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Fancd2Q80V62 1450 aa19.28■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Arhgef40Q3UPH7 1517 aa19.27■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Gm156Q58A37 223 aa19.27■□□□□ 0.68
Ccdc71-201ENSMUST00000061209 Kiaa1551Q5DTW7 1521 aa19.26■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Kdm5bQ80Y84 1544 aa19.24■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Mapkbp1Q6NS57 1503 aa19.23■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Naip2Q9QUK4 1447 aa19.22■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Znf608Q56A10 1511 aa19.22■□□□□ 0.67
Ccdc71-201ENSMUST00000061209 Mtus2Q3UHD3 1353 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms