RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Setd5Q5XJV7 1441 aa10.54□□□□□ -0.72
Bdnf-201ENSMUST00000053317 Fgd6Q69ZL1 1399 aa10.51□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Fam50aQ9WV03 339 aaKnown RBP10.51□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Disp1Q3TDN0 1521 aa10.5□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Shroom4Q1W617 1475 aa10.5□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Cc2d2bA0A286YDU8 1405 aa10.49□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Cep162Q6ZQ06 1403 aa10.48□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Jph4Q80WT0 628 aa10.48□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Top2aQ01320 1528 aaKnown RBP10.48□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Grin2aP35436 1464 aa10.47□□□□□ -0.73
Bdnf-201ENSMUST00000053317 WrnO09053 1401 aa10.47□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Gm156Q58A37 223 aa10.47□□□□□ -0.73
Bdnf-201ENSMUST00000053317 Aebp1Q640N1 1128 aa10.47□□□□□ -0.73
Bdnf-201ENSMUST00000053317 NrkQ9R0G8 1455 aa10.46□□□□□ -0.74
Bdnf-201ENSMUST00000053317 Carmil1Q6EDY6 1374 aa10.45□□□□□ -0.74
Bdnf-201ENSMUST00000053317 Samd9lQ69Z37 1561 aa10.44□□□□□ -0.74
Bdnf-201ENSMUST00000053317 TnnQ80Z71 1560 aa10.44□□□□□ -0.74
Bdnf-201ENSMUST00000053317 BlmO88700 1416 aa10.43□□□□□ -0.74
Bdnf-201ENSMUST00000053317 Hnrnpul2Q00PI9 745 aaKnown RBP10.42□□□□□ -0.74
Bdnf-201ENSMUST00000053317 Neo1P97798 1493 aa10.41□□□□□ -0.74
Bdnf-201ENSMUST00000053317 Kif27Q7M6Z4 1394 aa10.4□□□□□ -0.74
Bdnf-201ENSMUST00000053317 MlecQ6ZQI3 291 aaKnown RBP10.39□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Chic2Q9D9G3 165 aa10.38□□□□□ -0.75
Bdnf-201ENSMUST00000053317 CadpsQ80TJ1 1355 aa10.38□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Ythdc2B2RR83 1445 aaKnown RBP10.38□□□□□ -0.75
Bdnf-201ENSMUST00000053317 EprsQ8CGC7 1512 aaKnown RBP10.38□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Eea1Q8BL66 1411 aa10.38□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Mroh2bQ7M6Y6 1581 aa10.37□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Gm14025A2AP89 1413 aa10.37□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Safb2Q80YR5 991 aaKnown RBP10.36□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Arhgap35Q91YM2 1499 aa10.36□□□□□ -0.75
Bdnf-201ENSMUST00000053317 MyclP10166 368 aa10.35□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Gm13697A2AK42 830 aa10.35□□□□□ -0.75
Bdnf-201ENSMUST00000053317 SynmQ70IV5 1561 aa10.35□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Rusc2Q80U22 1514 aa10.34□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Eif4g3Q80XI3 1579 aaKnown RBP10.34□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Gm7298A0A0N4SVU1 1476 aa10.34□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Nup160Q9Z0W3 1402 aaKnown RBP10.34□□□□□ -0.75
Bdnf-201ENSMUST00000053317 Pla2r1Q62028 1487 aa10.33□□□□□ -0.76
Bdnf-201ENSMUST00000053317 AqrQ8CFQ3 1481 aaKnown RBP10.33□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Magi3Q9EQJ9 1476 aa10.33□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Pcdh10E9PXQ7 1057 aa10.32□□□□□ -0.76
Bdnf-201ENSMUST00000053317 PxdnQ3UQ28 1475 aa10.32□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Gapvd1Q6PAR5 1458 aa10.32□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Arhgap31A6X8Z5 1425 aa10.3□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Fyco1Q8VDC1 1437 aa10.28□□□□□ -0.76
Bdnf-201ENSMUST00000053317 Abcc1O35379 1528 aa10.27□□□□□ -0.76
Bdnf-201ENSMUST00000053317 TchhA0A0B4J1F9 1599 aa10.25□□□□□ -0.77
Bdnf-201ENSMUST00000053317 WizO88286 1684 aaKnown RBP10.25□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Erich6D3Z6S9 713 aa10.24□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Rrp7aQ9D1C9 280 aaKnown RBP10.24□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Lemd3Q9WU40 921 aa10.24□□□□□ -0.77
Bdnf-201ENSMUST00000053317 NclP09405 707 aaKnown RBP10.23□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Cux1P53564 1515 aa10.23□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Adgrl3Q80TS3 1537 aa10.23□□□□□ -0.77
Bdnf-201ENSMUST00000053317 Shroom2A2ALU4 1481 aa10.21□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Sart1Q9Z315 806 aaKnown RBP10.18□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Neurod1Q60867 357 aa10.18□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Tdrd9Q14BI7 1383 aa10.17□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Col17a1Q07563 1470 aa10.17□□□□□ -0.78
Bdnf-201ENSMUST00000053317 PtprtQ99M80 1454 aa10.17□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Polr1aO35134 1717 aaKnown RBP10.16□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Map3k1P53349 1493 aa10.16□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Cdk11bP24788 784 aaKnown RBP10.16□□□□□ -0.78
Bdnf-201ENSMUST00000053317 CntlnA2AM05 1397 aa10.16□□□□□ -0.78
Bdnf-201ENSMUST00000053317 Igf1rQ60751 1373 aa10.14□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Eid3Q3V124 375 aa10.14□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Cabp1Q9JLK7 227 aa10.14□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Cep170Q6A065 1588 aa10.13□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Ccdc141E9Q8Q6 1531 aa10.13□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Gpatch8A2A6A1 1505 aa10.13□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Atp1b4Q99ME6 356 aa10.13□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Ccnb3Q810T2 1396 aa10.12□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Gm13695A2AK44 830 aa10.12□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Atp10dQ8K2X1 1416 aa10.12□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Wdr66E9Q743 1299 aa10.1□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Kif3bQ61771 747 aa10.1□□□□□ -0.79
Bdnf-201ENSMUST00000053317 P3h3Q8CG70 732 aa10.1□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Ncoa2Q61026 1462 aa10.1□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Mtus2Q3UHD3 1353 aa10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 CenpbP27790 599 aa10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Os9Q8K2C7 672 aa10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Dhx57Q6P5D3 1388 aaKnown RBP10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Pbrm1Q8BSQ9 1634 aaKnown RBP10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Arap1Q4LDD4 1452 aa10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Amer1Q7TS75 1132 aa10.09□□□□□ -0.79
Bdnf-201ENSMUST00000053317 Znf608Q56A10 1511 aa10.08□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Mier1Q5UAK0 511 aa10.08□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Arhgef12Q8R4H2 1543 aaKnown RBP10.08□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Setd1bQ8CFT2 1985 aa10.08□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Zbtb4Q5F293 982 aa10.07□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Map3k5O35099 1380 aa10.06□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Cyb5rlB1AS42 316 aa10.06□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Fam163aQ8CAA5 168 aa10.06□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Abcc2Q8VI47 1543 aa10.06□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Magi1Q6RHR9 1471 aa10.05□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Abca16E9PWJ7 1678 aa10.05□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Ncoa3O09000 1398 aa10.04□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Adamts12Q811B3 1600 aa10.04□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Naip1Q9QWK5 1403 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 113.8 ms