RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Eif4g3Q80XI3 1579 aaKnown RBP35,72■■■■□ 3,31
Upf3a-201ENSMUST00000043767 Pbrm1Q8BSQ9 1634 aaKnown RBP35,68■■■■□ 3,3
Upf3a-201ENSMUST00000043767 Cux1P53564 1515 aa35,66■■■■□ 3,3
Upf3a-201ENSMUST00000043767 EprsQ8CGC7 1512 aaKnown RBP35,62■■■■□ 3,29
Upf3a-201ENSMUST00000043767 Eea1Q8BL66 1411 aa35,62■■■■□ 3,29
Upf3a-201ENSMUST00000043767 Ankrd26Q811D2 1581 aa35,61■■■■□ 3,29
Upf3a-201ENSMUST00000043767 Setd5Q5XJV7 1441 aa35,6■■■■□ 3,29
Upf3a-201ENSMUST00000043767 Rusc2Q80U22 1514 aa35,58■■■■□ 3,29
Upf3a-201ENSMUST00000043767 Cc2d2bA0A286YDU8 1405 aa35,57■■■■□ 3,28
Upf3a-201ENSMUST00000043767 Gpatch8A2A6A1 1505 aa35,53■■■■□ 3,28
Upf3a-201ENSMUST00000043767 Arap1Q4LDD4 1452 aa35,52■■■■□ 3,28
Upf3a-201ENSMUST00000043767 Polr1aO35134 1717 aaKnown RBP35,51■■■■□ 3,28
Upf3a-201ENSMUST00000043767 Ap3b1Q9Z1T1 1105 aa35,48■■■■□ 3,27
Upf3a-201ENSMUST00000043767 WizO88286 1684 aaKnown RBP35,46■■■■□ 3,27
Upf3a-201ENSMUST00000043767 Erich3F6QRE9 1637 aa35,45■■■■□ 3,27
Upf3a-201ENSMUST00000043767 Adamts12Q811B3 1600 aa35,45■■■■□ 3,27
Upf3a-201ENSMUST00000043767 Fyco1Q8VDC1 1437 aa35,45■■■■□ 3,27
Upf3a-201ENSMUST00000043767 CadpsQ80TJ1 1355 aa35,43■■■■□ 3,26
Upf3a-201ENSMUST00000043767 Rpap1Q80TE0 1409 aa35,42■■■■□ 3,26
Upf3a-201ENSMUST00000043767 PxdnQ3UQ28 1475 aa35,4■■■■□ 3,26
Upf3a-201ENSMUST00000043767 Gm7298A0A0N4SVU1 1476 aa35,37■■■■□ 3,25
Upf3a-201ENSMUST00000043767 TchhA0A0B4J1F9 1599 aa35,35■■■■□ 3,25
Upf3a-201ENSMUST00000043767 Abca16E9PWJ7 1678 aa35,35■■■■□ 3,25
Upf3a-201ENSMUST00000043767 Arhgef5E9Q7D5 1581 aa35,34■■■■□ 3,25
Upf3a-201ENSMUST00000043767 Pcf11G3X9Z4 1553 aa35,32■■■■□ 3,24
Upf3a-201ENSMUST00000043767 Lmo7E9PYF4 1699 aaKnown RBP35,3■■■■□ 3,24
Upf3a-201ENSMUST00000043767 Plekhg3Q4VAC9 1341 aa35,29■■■■□ 3,24
Upf3a-201ENSMUST00000043767 Abca5Q8K448 1642 aa35,28■■■■□ 3,24
Upf3a-201ENSMUST00000043767 Soga1E1U8D0 1418 aa35,23■■■■□ 3,23
Upf3a-201ENSMUST00000043767 Abcc2Q8VI47 1543 aa35,23■■■■□ 3,23
Upf3a-201ENSMUST00000043767 Arhgap27A2AB59 869 aa35,21■■■■□ 3,23
Upf3a-201ENSMUST00000043767 Aebp1Q640N1 1128 aa35,21■■■■□ 3,23
Upf3a-201ENSMUST00000043767 Tiam1Q60610 1591 aa35,11■■■■□ 3,21
Upf3a-201ENSMUST00000043767 Naip1Q9QWK5 1403 aa35,11■■■■□ 3,21
Upf3a-201ENSMUST00000043767 BlmO88700 1416 aa35,09■■■■□ 3,21
Upf3a-201ENSMUST00000043767 CntlnA2AM05 1397 aa35,06■■■■□ 3,2
Upf3a-201ENSMUST00000043767 Slx4Q6P1D7 1565 aa35,06■■■■□ 3,2
Upf3a-201ENSMUST00000043767 WrnO09053 1401 aa35,03■■■■□ 3,2
Upf3a-201ENSMUST00000043767 UbtfP25976 765 aaKnown RBP35,03■■■■□ 3,2
Upf3a-201ENSMUST00000043767 Shroom2A2ALU4 1481 aa35,02■■■■□ 3,2
Upf3a-201ENSMUST00000043767 Fgd6Q69ZL1 1399 aa35,02■■■■□ 3,2
Upf3a-201ENSMUST00000043767 Map3k4O08648 1597 aa34,98■■■■□ 3,19
Upf3a-201ENSMUST00000043767 Dnmt1P13864 1620 aaKnown RBP34,98■■■■□ 3,19
Upf3a-201ENSMUST00000043767 Lmod2Q3UHZ5 550 aa34,94■■■■□ 3,18
Upf3a-201ENSMUST00000043767 BC005561E9Q5E2 1589 aa34,93■■■■□ 3,18
Upf3a-201ENSMUST00000043767 AknaQ80VW7 1404 aa34,93■■■■□ 3,18
Upf3a-201ENSMUST00000043767 Kif27Q7M6Z4 1394 aa34,9■■■■□ 3,18
Upf3a-201ENSMUST00000043767 Neo1P97798 1493 aa34,9■■■■□ 3,18
Upf3a-201ENSMUST00000043767 Peg3Q3URU2 1571 aa34,89■■■■□ 3,18
Upf3a-201ENSMUST00000043767 Gm1043A0A140LJC2 1431 aa34,86■■■■□ 3,17
Upf3a-201ENSMUST00000043767 Zcchc11B2RX14 1644 aaKnown RBP34,73■■■■□ 3,15
Upf3a-201ENSMUST00000043767 Jph4Q80WT0 628 aa34,7■■■■□ 3,15
Upf3a-201ENSMUST00000043767 Rapgef6Q5NCJ1 1609 aa34,68■■■■□ 3,14
Upf3a-201ENSMUST00000043767 Arhgap31A6X8Z5 1425 aa34,68■■■■□ 3,14
Upf3a-201ENSMUST00000043767 Abcc1O35379 1528 aa34,67■■■■□ 3,14
Upf3a-201ENSMUST00000043767 Arhgef12Q8R4H2 1543 aaKnown RBP34,67■■■■□ 3,14
Upf3a-201ENSMUST00000043767 Mier1Q5UAK0 511 aa34,62■■■■□ 3,13
Upf3a-201ENSMUST00000043767 Pelp1Q9DBD5 1123 aaKnown RBP34,61■■■■□ 3,13
Upf3a-201ENSMUST00000043767 Gm14025A2AP89 1413 aa34,61■■■■□ 3,13
Upf3a-201ENSMUST00000043767 Pcgf6Q99NA9 353 aa34,6■■■■□ 3,13
Upf3a-201ENSMUST00000043767 Ncoa3O09000 1398 aa34,57■■■■□ 3,13
Upf3a-201ENSMUST00000043767 Fkbp15Q6P9Q6 1216 aaKnown RBP34,57■■■■□ 3,12
Upf3a-201ENSMUST00000043767 Chd1P40201 1711 aa34,55■■■■□ 3,12
Upf3a-201ENSMUST00000043767 Ccdc141E9Q8Q6 1531 aa34,55■■■■□ 3,12
Upf3a-201ENSMUST00000043767 Mug1P28665 1476 aa34,52■■■■□ 3,12
Upf3a-201ENSMUST00000043767 Arhgef11Q68FM7 1552 aa34,52■■■■□ 3,12
Upf3a-201ENSMUST00000043767 Pabpn1Q8CCS6 302 aaKnown RBP34,51■■■■□ 3,12
Upf3a-201ENSMUST00000043767 NexmifQ5DTT1 1515 aa34,51■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Rrbp1Q99PL5 1605 aaKnown RBP34,5■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Ncapd3Q6ZQK0 1506 aa34,5■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Mroh2aD3Z750 1679 aa34,49■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Lmtk2Q3TYD6 1471 aa34,47■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Ncoa2Q61026 1462 aa34,47■■■■□ 3,11
Upf3a-201ENSMUST00000043767 Ccnb3Q810T2 1396 aa34,45■■■■□ 3,11
Upf3a-201ENSMUST00000043767 3425401B19RikD3Z1D3 1412 aa34,43■■■■□ 3,1
Upf3a-201ENSMUST00000043767 Magi1Q6RHR9 1471 aa34,41■■■■□ 3,1
Upf3a-201ENSMUST00000043767 Ythdc2B2RR83 1445 aaKnown RBP34,37■■■■□ 3,09
Upf3a-201ENSMUST00000043767 Kiaa1551Q5DTW7 1521 aa34,34■■■■□ 3,09
Upf3a-201ENSMUST00000043767 Cdc42bpaQ3UU96 1719 aa34,33■■■■□ 3,09
Upf3a-201ENSMUST00000043767 Gapvd1Q6PAR5 1458 aa34,32■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Prex2Q3LAC4 1598 aa34,3■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Fam163aQ8CAA5 168 aa34,29■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Kdm5bQ80Y84 1544 aa34,29■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Gcc2Q8CHG3 1679 aa34,28■■■■□ 3,08
Upf3a-201ENSMUST00000043767 PtprtQ99M80 1454 aa34,27■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Dhx57Q6P5D3 1388 aaKnown RBP34,27■■■■□ 3,08
Upf3a-201ENSMUST00000043767 Fancd2Q80V62 1450 aa34,24■■■■□ 3,07
Upf3a-201ENSMUST00000043767 Mapkbp1Q6NS57 1503 aa34,23■■■■□ 3,07
Upf3a-201ENSMUST00000043767 Cul7Q8VE73 1689 aa34,2■■■■□ 3,06
Upf3a-201ENSMUST00000043767 Cep170Q6A065 1588 aa34,17■■■■□ 3,06
Upf3a-201ENSMUST00000043767 A2mQ6GQT1 1474 aa34,16■■■■□ 3,06
Upf3a-201ENSMUST00000043767 Fam50aQ9WV03 339 aaKnown RBP34,16■■■■□ 3,06
Upf3a-201ENSMUST00000043767 Arhgef40Q3UPH7 1517 aa34,14■■■■□ 3,06
Upf3a-201ENSMUST00000043767 NhsB1AV60 1647 aa34,14■■■■□ 3,06
Upf3a-201ENSMUST00000043767 Ifnlr1Q8CGK5 535 aa34,11■■■■□ 3,05
Upf3a-201ENSMUST00000043767 Adcy10Q8C0T9 1614 aa34,09■■■■□ 3,05
Upf3a-201ENSMUST00000043767 Znf608Q56A10 1511 aa34,03■■■■□ 3,04
Upf3a-201ENSMUST00000043767 Naip2Q9QUK4 1447 aa34,03■■■■□ 3,04
Upf3a-201ENSMUST00000043767 Fam208aQ69ZR9 1610 aaKnown RBP34,03■■■■□ 3,04
Upf3a-201ENSMUST00000043767 Igf1rQ60751 1373 aa34,03■■■■□ 3,04
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