RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Pbrm1Q8BSQ9 1634 aaKnown RBP26.03■■□□□ 1.76
Rpf1-201ENSMUST00000029838 Ankrd26Q811D2 1581 aa26.02■■□□□ 1.76
Rpf1-201ENSMUST00000029838 Magi3Q9EQJ9 1476 aa25.99■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Grin2aP35436 1464 aa25.98■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Fyco1Q8VDC1 1437 aa25.98■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Arap1Q4LDD4 1452 aa25.98■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Pla2r1Q62028 1487 aa25.97■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Arhgef5E9Q7D5 1581 aa25.97■■□□□ 1.75
Rpf1-201ENSMUST00000029838 Cux1P53564 1515 aa25.94■■□□□ 1.74
Rpf1-201ENSMUST00000029838 EprsQ8CGC7 1512 aaKnown RBP25.93■■□□□ 1.74
Rpf1-201ENSMUST00000029838 Nup160Q9Z0W3 1402 aaKnown RBP25.89■■□□□ 1.74
Rpf1-201ENSMUST00000029838 Gpatch8A2A6A1 1505 aa25.88■■□□□ 1.73
Rpf1-201ENSMUST00000029838 UbtfP25976 765 aaKnown RBP25.88■■□□□ 1.73
Rpf1-201ENSMUST00000029838 Ap3b1Q9Z1T1 1105 aa25.88■■□□□ 1.73
Rpf1-201ENSMUST00000029838 Plekhg3Q4VAC9 1341 aa25.86■■□□□ 1.73
Rpf1-201ENSMUST00000029838 Cc2d2bA0A286YDU8 1405 aa25.86■■□□□ 1.73
Rpf1-201ENSMUST00000029838 CntlnA2AM05 1397 aa25.83■■□□□ 1.73
Rpf1-201ENSMUST00000029838 Lmo7E9PYF4 1699 aaKnown RBP25.82■■□□□ 1.72
Rpf1-201ENSMUST00000029838 Tiam1Q60610 1591 aa25.82■■□□□ 1.72
Rpf1-201ENSMUST00000029838 Setd1bQ8CFT2 1985 aa25.81■■□□□ 1.72
Rpf1-201ENSMUST00000029838 Pcf11G3X9Z4 1553 aa25.81■■□□□ 1.72
Rpf1-201ENSMUST00000029838 Adamts12Q811B3 1600 aa25.78■■□□□ 1.72
Rpf1-201ENSMUST00000029838 CadpsQ80TJ1 1355 aa25.77■■□□□ 1.72
Rpf1-201ENSMUST00000029838 Gm7298A0A0N4SVU1 1476 aa25.76■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Eif4g3Q80XI3 1579 aaKnown RBP25.76■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Aebp1Q640N1 1128 aa25.75■■□□□ 1.71
Rpf1-201ENSMUST00000029838 TchhA0A0B4J1F9 1599 aa25.75■■□□□ 1.71
Rpf1-201ENSMUST00000029838 WizO88286 1684 aaKnown RBP25.74■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Naip1Q9QWK5 1403 aa25.74■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Abca5Q8K448 1642 aa25.73■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Mier1Q5UAK0 511 aa25.73■■□□□ 1.71
Rpf1-201ENSMUST00000029838 BlmO88700 1416 aa25.72■■□□□ 1.71
Rpf1-201ENSMUST00000029838 Rusc2Q80U22 1514 aa25.7■■□□□ 1.7
Rpf1-201ENSMUST00000029838 Peg3Q3URU2 1571 aa25.68■■□□□ 1.7
Rpf1-201ENSMUST00000029838 Soga1E1U8D0 1418 aa25.68■■□□□ 1.7
Rpf1-201ENSMUST00000029838 Abca16E9PWJ7 1678 aa25.63■■□□□ 1.69
Rpf1-201ENSMUST00000029838 Slx4Q6P1D7 1565 aa25.62■■□□□ 1.69
Rpf1-201ENSMUST00000029838 PxdnQ3UQ28 1475 aa25.59■■□□□ 1.69
Rpf1-201ENSMUST00000029838 NefmP08553 848 aa25.58■■□□□ 1.68
Rpf1-201ENSMUST00000029838 Arhgap27A2AB59 869 aa25.56■■□□□ 1.68
Rpf1-201ENSMUST00000029838 Kif27Q7M6Z4 1394 aa25.53■■□□□ 1.68
Rpf1-201ENSMUST00000029838 Lmod2Q3UHZ5 550 aa25.5■■□□□ 1.67
Rpf1-201ENSMUST00000029838 Ncapd3Q6ZQK0 1506 aa25.48■■□□□ 1.67
Rpf1-201ENSMUST00000029838 WrnO09053 1401 aa25.48■■□□□ 1.67
Rpf1-201ENSMUST00000029838 Abcc2Q8VI47 1543 aa25.47■■□□□ 1.67
Rpf1-201ENSMUST00000029838 Gm1043A0A140LJC2 1431 aa25.45■■□□□ 1.66
Rpf1-201ENSMUST00000029838 Shroom2A2ALU4 1481 aa25.42■■□□□ 1.66
Rpf1-201ENSMUST00000029838 Fgd6Q69ZL1 1399 aa25.4■■□□□ 1.66
Rpf1-201ENSMUST00000029838 Map3k4O08648 1597 aa25.39■■□□□ 1.65
Rpf1-201ENSMUST00000029838 Dnmt1P13864 1620 aaKnown RBP25.34■■□□□ 1.65
Rpf1-201ENSMUST00000029838 Rapgef6Q5NCJ1 1609 aa25.32■■□□□ 1.64
Rpf1-201ENSMUST00000029838 Ncoa2Q61026 1462 aa25.27■■□□□ 1.64
Rpf1-201ENSMUST00000029838 Lmtk2Q3TYD6 1471 aa25.27■■□□□ 1.64
Rpf1-201ENSMUST00000029838 AknaQ80VW7 1404 aa25.24■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Jph4Q80WT0 628 aa25.23■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Neo1P97798 1493 aa25.22■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Arhgap31A6X8Z5 1425 aa25.22■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Ccnb3Q810T2 1396 aa25.22■■□□□ 1.63
Rpf1-201ENSMUST00000029838 BC005561E9Q5E2 1589 aa25.22■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Mug1P28665 1476 aa25.21■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Dhx57Q6P5D3 1388 aaKnown RBP25.21■■□□□ 1.63
Rpf1-201ENSMUST00000029838 Ccdc141E9Q8Q6 1531 aa25.19■■□□□ 1.62
Rpf1-201ENSMUST00000029838 NexmifQ5DTT1 1515 aa25.19■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Rrbp1Q99PL5 1605 aaKnown RBP25.19■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Gcc2Q8CHG3 1679 aa25.18■■□□□ 1.62
Rpf1-201ENSMUST00000029838 3425401B19RikD3Z1D3 1412 aa25.17■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Arhgef11Q68FM7 1552 aa25.17■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Mia2Q91ZV0 1396 aa25.15■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Ncoa3O09000 1398 aa25.14■■□□□ 1.62
Rpf1-201ENSMUST00000029838 Arhgef12Q8R4H2 1543 aaKnown RBP25.14■■□□□ 1.61
Rpf1-201ENSMUST00000029838 Fam50aQ9WV03 339 aaKnown RBP25.13■■□□□ 1.61
Rpf1-201ENSMUST00000029838 Fam163aQ8CAA5 168 aa25.12■■□□□ 1.61
Rpf1-201ENSMUST00000029838 Gm14025A2AP89 1413 aa25.11■■□□□ 1.61
Rpf1-201ENSMUST00000029838 Magi1Q6RHR9 1471 aa25.1■■□□□ 1.61
Rpf1-201ENSMUST00000029838 Abcc1O35379 1528 aa25.06■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Kiaa1551Q5DTW7 1521 aa25.06■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Cdc42bpaQ3UU96 1719 aa25.05■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Zcchc11B2RX14 1644 aaKnown RBP25.05■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Ccer2J3QPU5 274 aa25.04■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Fhad1A6PWD2 1420 aa25.04■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Kdm5bQ80Y84 1544 aa25.03■■□□□ 1.6
Rpf1-201ENSMUST00000029838 A2mQ6GQT1 1474 aa25.02■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Naip2Q9QUK4 1447 aa25.02■■□□□ 1.6
Rpf1-201ENSMUST00000029838 Mapkbp1Q6NS57 1503 aa25■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Mroh2aD3Z750 1679 aa25■■□□□ 1.59
Rpf1-201ENSMUST00000029838 UacaQ8CGB3 1411 aa24.99■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Cdk11bP24788 784 aaKnown RBP24.97■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Vps8Q0P5W1 1427 aa24.97■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Fkbp15Q6P9Q6 1216 aaKnown RBP24.97■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Chd1P40201 1711 aa24.97■■□□□ 1.59
Rpf1-201ENSMUST00000029838 Fancd2Q80V62 1450 aa24.95■■□□□ 1.58
Rpf1-201ENSMUST00000029838 Las1lA2BE28 776 aaKnown RBP24.94■■□□□ 1.58
Rpf1-201ENSMUST00000029838 Prex2Q3LAC4 1598 aa24.92■■□□□ 1.58
Rpf1-201ENSMUST00000029838 Adcy10Q8C0T9 1614 aa24.9■■□□□ 1.58
Rpf1-201ENSMUST00000029838 Mlh3A0A1Y7VMP7 1443 aa24.89■■□□□ 1.58
Rpf1-201ENSMUST00000029838 Plekhh2Q8C115 1491 aa24.89■■□□□ 1.58
Rpf1-201ENSMUST00000029838 TonslQ6NZL6 1363 aa24.88■■□□□ 1.57
Rpf1-201ENSMUST00000029838 NclP09405 707 aaKnown RBP24.86■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Pabpn1Q8CCS6 302 aaKnown RBP24.86■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Pelp1Q9DBD5 1123 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms