RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
LINC00339-212ENST00000642072 NDUFS6O75380 124 aaKnown RBP5.33□□□□□ -1.56
LINC00339-212ENST00000642072 RAB5CP51148 216 aa5.33□□□□□ -1.56
LINC00339-212ENST00000642072 EIF5AP63241 154 aaKnown RBP5.33□□□□□ -1.56
LINC00339-212ENST00000642072 GTSF1Q8WW33 167 aa5.33□□□□□ -1.56
LINC00339-212ENST00000642072 A0A096LNI7 61 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 IGKV2-24A0A0C4DH68 120 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 MAP1LC3B2A6NCE7 125 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 RPS10P46783 165 aaKnown RBP5.32□□□□□ -1.56
LINC00339-212ENST00000642072 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 SPANXN1Q5VSR9 72 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 STPG4Q8N801 248 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 AP1S3Q96PC3 154 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 TMEM243Q9BU79 118 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 MAP1LC3BQ9GZQ8 125 aa5.32□□□□□ -1.56
LINC00339-212ENST00000642072 GVQW2A0A096LPI5 108 aaPredicted RBP5.31□□□□□ -1.56
LINC00339-212ENST00000642072 AKR1C3P42330 323 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 EIF5AL1Q6IS14 154 aaKnown RBP5.31□□□□□ -1.56
LINC00339-212ENST00000642072 REG3GQ6UW15 175 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 LYPD6BQ8NI32 183 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 PGLYRP4Q96LB8 373 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 CYTL1Q9NRR1 136 aa5.31□□□□□ -1.56
LINC00339-212ENST00000642072 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
LINC00339-212ENST00000642072 SSTP61278 116 aa5.3□□□□□ -1.56
LINC00339-212ENST00000642072 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
LINC00339-212ENST00000642072 CST9LP1Q5W188 147 aa5.3□□□□□ -1.56
LINC00339-212ENST00000642072 TMA7Q9Y2S6 64 aaKnown RBP5.3□□□□□ -1.56
LINC00339-212ENST00000642072 BORCS7-ASMTA0A0B4J1R7 106 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 SCO2A0A1W2PP80 73 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 H7C1H1 209 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 PAGE4O60829 102 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 S100A9P06702 114 aaKnown RBP5.29□□□□□ -1.56
LINC00339-212ENST00000642072 IGLC6P0CF74 106 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 SMIM17P0DL12 118 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 C10orf91Q5T1B1 145 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 AKR1C8PQ5T2L2 129 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 BAGE2Q86Y30 109 aa5.29□□□□□ -1.56
LINC00339-212ENST00000642072 CARHSP1Q9Y2V2 147 aaKnown RBP5.29□□□□□ -1.56
LINC00339-212ENST00000642072 TMEM218A2RU14 115 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 SCO1O75880 301 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 MGPP08493 103 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 SULT1A2P50226 295 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 BLOC1S1P78537 153 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 FOXI1Q12951 378 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 RASL11AQ6T310 242 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 Q6ZRP5 223 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
LINC00339-212ENST00000642072 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
LINC00339-212ENST00000642072 SVBPQ8N300 66 aa5.27□□□□□ -1.57
LINC00339-212ENST00000642072 SEC11CQ9BY50 192 aa5.27□□□□□ -1.57
LINC00339-212ENST00000642072 NIT2Q9NQR4 276 aa5.27□□□□□ -1.57
LINC00339-212ENST00000642072 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
LINC00339-212ENST00000642072 AMTP48728 403 aa5.26□□□□□ -1.57
LINC00339-212ENST00000642072 FER1L6-AS1Q8NA97 138 aa5.26□□□□□ -1.57
LINC00339-212ENST00000642072 MBD3L1Q8WWY6 194 aa5.26□□□□□ -1.57
LINC00339-212ENST00000642072 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 C19orf71A6NCJ1 209 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 UBE2L6O14933 153 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 APOC3P02656 99 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 NTF3P20783 257 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 RPL35P42766 123 aaKnown RBP5.25□□□□□ -1.57
LINC00339-212ENST00000642072 CACNG7P62955 275 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 COTL1Q14019 142 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 TPPP3Q9BW30 176 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 SMDT1Q9H4I9 107 aa5.25□□□□□ -1.57
LINC00339-212ENST00000642072 SNAPINO95295 136 aa5.24□□□□□ -1.57
LINC00339-212ENST00000642072 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
LINC00339-212ENST00000642072 SFT2D1Q8WV19 159 aa5.24□□□□□ -1.57
LINC00339-212ENST00000642072 C11orf52Q96A22 123 aa5.24□□□□□ -1.57
LINC00339-212ENST00000642072 LINC00526Q96FQ7 95 aa5.24□□□□□ -1.57
LINC00339-212ENST00000642072 A0A1W2PNN7 141 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 FAM231BA6NCW3 169 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 F2Z2F3 143 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 FGF6P10767 208 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 ADCYAP1P18509 176 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 RPS20P60866 119 aaKnown RBP5.23□□□□□ -1.57
LINC00339-212ENST00000642072 CENPWQ5EE01 88 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 GATD1Q8NB37 220 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 OR2D3Q8NGH3 330 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 CARD19Q96LW7 228 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 CNFNQ9BYD5 112 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 PKIGQ9Y2B9 76 aa5.23□□□□□ -1.57
LINC00339-212ENST00000642072 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.22□□□□□ -1.57
LINC00339-212ENST00000642072 TRAV26-2A0A0B4J265 109 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 IGHV1-58A0A0C4DH39 117 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 A0A1B0GV50 99 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 IGKV2-29A2NJV5 120 aaPredicted RBP5.22□□□□□ -1.57
LINC00339-212ENST00000642072 UMAD1C9J7I0 102 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 F8W036 122 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 H7C423 109 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 NCR2O95944 276 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 TRGC1P0CF51 173 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 CTRLP40313 264 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 XCL1P47992 114 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 LYZL1Q6UWQ5 148 aa5.22□□□□□ -1.57
LINC00339-212ENST00000642072 ZNF664Q8N3J9 261 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms