RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 CLPSL2Q6UWE3 100 aa11.46□□□□□ -0.57
PHGDH-227ENST00000641811 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 CRPP02741 224 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
PHGDH-227ENST00000641811 CAMPP49913 170 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 Q0VG73 95 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 LINC00269Q8N2A0 174 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 COX11Q9Y6N1 276 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 DNAH5Q8TE73 4624 aa11.45□□□□□ -0.58
PHGDH-227ENST00000641811 RYR1P21817 5038 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 IGLV4-60A0A075B6I1 120 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 TRBV6-5A0A0K0K1A5 114 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 CDK2AP2O75956 126 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 NCR2O95944 276 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 KRTAP10-1P60331 282 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 MRAP2Q96G30 205 aa11.44□□□□□ -0.58
PHGDH-227ENST00000641811 MRPL54Q6P161 138 aaKnown RBP11.43□□□□□ -0.58
PHGDH-227ENST00000641811 C20orf203Q8NBC4 194 aa11.43□□□□□ -0.58
PHGDH-227ENST00000641811 C1orf43Q9BWL3 253 aa11.43□□□□□ -0.58
PHGDH-227ENST00000641811 KRTAP17-1Q9BYP8 105 aa11.43□□□□□ -0.58
PHGDH-227ENST00000641811 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
PHGDH-227ENST00000641811 PRR34Q9NV39 138 aa11.43□□□□□ -0.58
PHGDH-227ENST00000641811 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
PHGDH-227ENST00000641811 UBE2L6O14933 153 aa11.42□□□□□ -0.58
PHGDH-227ENST00000641811 PMCHP20382 165 aa11.42□□□□□ -0.58
PHGDH-227ENST00000641811 A0A1B0GUV1 79 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 I3L3M4 83 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 GCSHP23434 173 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 MIAQ16674 131 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 MRPL51Q4U2R6 128 aaKnown RBP11.41□□□□□ -0.58
PHGDH-227ENST00000641811 FAM104BQ5XKR9 115 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-227ENST00000641811 TMEM70Q9BUB7 260 aa11.41□□□□□ -0.58
PHGDH-227ENST00000641811 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-227ENST00000641811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-227ENST00000641811 A0A1B0GW15 77 aa11.4□□□□□ -0.58
PHGDH-227ENST00000641811 IGKV2-29A2NJV5 120 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-227ENST00000641811 TSHBP01222 138 aa11.4□□□□□ -0.58
PHGDH-227ENST00000641811 APCSP02743 223 aa11.4□□□□□ -0.58
PHGDH-227ENST00000641811 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.58
PHGDH-227ENST00000641811 REG3AQ06141 175 aa11.4□□□□□ -0.58
PHGDH-227ENST00000641811 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-227ENST00000641811 TMEM242Q9NWH2 141 aa11.4□□□□□ -0.58
PHGDH-227ENST00000641811 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
PHGDH-227ENST00000641811 PPP1R2P9O14990 202 aa11.39□□□□□ -0.59
PHGDH-227ENST00000641811 HBBP68871 147 aa11.39□□□□□ -0.59
PHGDH-227ENST00000641811 NRACQ8N912 160 aa11.39□□□□□ -0.59
PHGDH-227ENST00000641811 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
PHGDH-227ENST00000641811 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
PHGDH-227ENST00000641811 MT-ND4LP03901 98 aa11.38□□□□□ -0.59
PHGDH-227ENST00000641811 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
PHGDH-227ENST00000641811 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
PHGDH-227ENST00000641811 TRBV27A0A0K0K1C4 114 aa11.37□□□□□ -0.59
PHGDH-227ENST00000641811 NDUFA5Q16718 116 aa11.37□□□□□ -0.59
PHGDH-227ENST00000641811 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
PHGDH-227ENST00000641811 HSPG2P98160 4391 aa11.37□□□□□ -0.59
PHGDH-227ENST00000641811 TMEM218A2RU14 115 aa11.36□□□□□ -0.59
PHGDH-227ENST00000641811 FGF6P10767 208 aa11.36□□□□□ -0.59
PHGDH-227ENST00000641811 AMMECR1LQ6DCA0 310 aa11.36□□□□□ -0.59
PHGDH-227ENST00000641811 RNASEKQ6P5S7 137 aaKnown RBP11.36□□□□□ -0.59
PHGDH-227ENST00000641811 UQCC3Q6UW78 93 aa11.36□□□□□ -0.59
PHGDH-227ENST00000641811 ANAPC16Q96DE5 110 aa11.36□□□□□ -0.59
PHGDH-227ENST00000641811 S100A8P05109 93 aa11.35□□□□□ -0.59
PHGDH-227ENST00000641811 ESDP10768 282 aa11.35□□□□□ -0.59
PHGDH-227ENST00000641811 CKS2P33552 79 aa11.35□□□□□ -0.59
PHGDH-227ENST00000641811 XGP55808 180 aa11.35□□□□□ -0.59
PHGDH-227ENST00000641811 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
PHGDH-227ENST00000641811 KRTAP4-5Q9BYR2 181 aa11.35□□□□□ -0.59
PHGDH-227ENST00000641811 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 USP17L23D6RBM5 183 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 F8W036 122 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 H7C423 109 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 VCYO14598 125 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 PPP1R17O96001 155 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 LINC01620Q4KN68 170 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 COMMD7Q86VX2 200 aa11.34□□□□□ -0.59
PHGDH-227ENST00000641811 LINC00862A6NCI5 91 aa11.33□□□□□ -0.6
PHGDH-227ENST00000641811 D6R8Y8 96 aa11.33□□□□□ -0.6
PHGDH-227ENST00000641811 HAMPP81172 84 aa11.33□□□□□ -0.6
PHGDH-227ENST00000641811 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
PHGDH-227ENST00000641811 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
PHGDH-227ENST00000641811 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
PHGDH-227ENST00000641811 FCER1GP30273 86 aa11.32□□□□□ -0.6
PHGDH-227ENST00000641811 FAM30AQ9NZY2 134 aa11.32□□□□□ -0.6
PHGDH-227ENST00000641811 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
PHGDH-227ENST00000641811 NPYP01303 97 aa11.31□□□□□ -0.6
PHGDH-227ENST00000641811 C7orf77A4D0Y5 90 aa11.3□□□□□ -0.6
PHGDH-227ENST00000641811 PRSS1P07477 247 aa11.3□□□□□ -0.6
PHGDH-227ENST00000641811 C14orf177Q52M58 125 aa11.3□□□□□ -0.6
PHGDH-227ENST00000641811 KIR2DL4Q99706 377 aa11.3□□□□□ -0.6
PHGDH-227ENST00000641811 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
PHGDH-227ENST00000641811 PCLOQ9Y6V0 5065 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
PHGDH-227ENST00000641811 Q8N1X5 172 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 TMEM101Q96IK0 257 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 SEC11CQ9BY50 192 aa11.29□□□□□ -0.6
PHGDH-227ENST00000641811 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
PHGDH-227ENST00000641811 TMEM136Q6ZRR5 245 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms