RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 HHLA3Q9XRX5 114 aa6.83□□□□□ -1.32
PHGDH-222ENST00000641587 TRBV6-4A0A1B0GX49 114 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 PPP1R17O96001 155 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 RAB5BP61020 215 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 SLC25A29Q8N8R3 303 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 ALKBH7Q9BT30 221 aaPredicted RBP6.82□□□□□ -1.32
PHGDH-222ENST00000641587 MAP1LC3AQ9H492 121 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 ST20Q9HBF5 79 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 PRO0255Q9UI72 69 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
PHGDH-222ENST00000641587 LOC100131303A0A0U1RQF7 123 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 LOC389332A0A1B0GUA5 103 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GYPEP15421 78 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 CRYBA4P53673 196 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 RPL36AP83881 106 aaKnown RBP6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GAGE1Q13065 139 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GAGE4Q13068 117 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GAGE5Q13069 117 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 IQCJQ1A5X6 159 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 GAGE13Q4V321 117 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 NRACQ8N912 160 aa6.81□□□□□ -1.32
PHGDH-222ENST00000641587 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
PHGDH-222ENST00000641587 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
PHGDH-222ENST00000641587 TRBV10-1A0A0K0K1A3 114 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 H3BNG1 76 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 PHOX2AO14813 284 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 SIVA1O15304 175 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-222ENST00000641587 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 PGPEP1Q9NXJ5 209 aa6.8□□□□□ -1.32
PHGDH-222ENST00000641587 A0A087WTM6 91 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 PMCHP20382 165 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
PHGDH-222ENST00000641587 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 NEGR1Q7Z3B1 354 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 C18orf32Q8TCD1 76 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 C20orf78Q9BR46 151 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 Q9UF83 564 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
PHGDH-222ENST00000641587 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
PHGDH-222ENST00000641587 TRBV7-3A0A075B6L6 115 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 NDUFA6P56556 154 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 CDPF1Q6NVV7 123 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 TMEM70Q9BUB7 260 aa6.78□□□□□ -1.32
PHGDH-222ENST00000641587 VCYO14598 125 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 EREGO14944 169 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 S100A6P06703 90 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 FCER1GP30273 86 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 IFI27P40305 119 aaPredicted RBP6.77□□□□□ -1.33
PHGDH-222ENST00000641587 UBE2D3P61077 147 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 UBE2D2P62837 147 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 MRPL23Q16540 153 aaKnown RBP6.77□□□□□ -1.33
PHGDH-222ENST00000641587 Q8N8P6 123 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 KIR2DL4Q99706 377 aa6.77□□□□□ -1.33
PHGDH-222ENST00000641587 NXT2Q9NPJ8 142 aaKnown RBP6.77□□□□□ -1.33
PHGDH-222ENST00000641587 I3L3M4 83 aa6.76□□□□□ -1.33
PHGDH-222ENST00000641587 Q0VG73 95 aa6.76□□□□□ -1.33
PHGDH-222ENST00000641587 COTL1Q14019 142 aa6.76□□□□□ -1.33
PHGDH-222ENST00000641587 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
PHGDH-222ENST00000641587 TCAPO15273 167 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 SERF1AO75920 110 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 POLR2KP53803 58 aaKnown RBP6.75□□□□□ -1.33
PHGDH-222ENST00000641587 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
PHGDH-222ENST00000641587 SH2D6Q7Z4S9 175 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 DAZ4Q86SG3 579 aaKnown RBP6.75□□□□□ -1.33
PHGDH-222ENST00000641587 NIT1Q86X76 327 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 WFDC10BQ8IUB3 73 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 DAZ3Q9NR90 486 aaKnown RBP6.75□□□□□ -1.33
PHGDH-222ENST00000641587 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 HMCN2Q8NDA2 5059 aa6.75□□□□□ -1.33
PHGDH-222ENST00000641587 TRBV27A0A0K0K1C4 114 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 PRSS47A8MTI9 375 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 HSBP1O75506 76 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 LINC00614P0C842 121 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 LINC00694P0DN24 101 aa6.74□□□□□ -1.33
PHGDH-222ENST00000641587 GCSHP23434 173 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms