RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 LCE6AA0A183 80 aa8.99□□□□□ -0.97
PHGDH-218ENST00000641491 K7EMI3 77 aa8.99□□□□□ -0.97
PHGDH-218ENST00000641491 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
PHGDH-218ENST00000641491 TIRAPP58753 221 aa8.99□□□□□ -0.97
PHGDH-218ENST00000641491 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
PHGDH-218ENST00000641491 LYPD5Q6UWN5 251 aa8.99□□□□□ -0.97
PHGDH-218ENST00000641491 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
PHGDH-218ENST00000641491 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
PHGDH-218ENST00000641491 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
PHGDH-218ENST00000641491 LAGE3Q14657 143 aa8.98□□□□□ -0.97
PHGDH-218ENST00000641491 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
PHGDH-218ENST00000641491 TRAV9-2A0A087WT02 112 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 LY6G6CO95867 125 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 IFI27P40305 119 aaPredicted RBP8.97□□□□□ -0.97
PHGDH-218ENST00000641491 POLR2KP53803 58 aaKnown RBP8.97□□□□□ -0.97
PHGDH-218ENST00000641491 IQCJQ1A5X6 159 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 DGAT2L7PQ6IED9 249 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 Q9UF83 564 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 MRPS16Q9Y3D3 137 aaKnown RBP8.97□□□□□ -0.97
PHGDH-218ENST00000641491 LYSTQ99698 3801 aa8.97□□□□□ -0.97
PHGDH-218ENST00000641491 S100A6P06703 90 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 BTF3P20290 206 aaKnown RBP8.96□□□□□ -0.98
PHGDH-218ENST00000641491 ESRGQ1W209 222 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 DEFB104AQ8WTQ1 72 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 DNAH1Q9P2D7 4330 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.98
PHGDH-218ENST00000641491 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
PHGDH-218ENST00000641491 HSBP1O75506 76 aa8.95□□□□□ -0.98
PHGDH-218ENST00000641491 TSHBP01222 138 aa8.95□□□□□ -0.98
PHGDH-218ENST00000641491 LINC00614P0C842 121 aa8.95□□□□□ -0.98
PHGDH-218ENST00000641491 CHCHD1Q96BP2 118 aaKnown RBP8.95□□□□□ -0.98
PHGDH-218ENST00000641491 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
PHGDH-218ENST00000641491 NACAE9PAV3 2078 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 H7C423 109 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 SIVA1O15304 175 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 GAGE6Q13070 117 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 TTC32Q5I0X7 151 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 LINC00588Q9Y4M8 146 aa8.94□□□□□ -0.98
PHGDH-218ENST00000641491 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-218ENST00000641491 IGKV2-29A2NJV5 120 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-218ENST00000641491 CRPP02741 224 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 Q0VG73 95 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 LGALS9CQ6DKI2 356 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 Q6ZN92 141 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 NIT1Q86X76 327 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 C10orf126Q8N4M7 172 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 CHCHD7Q9BUK0 85 aa8.93□□□□□ -0.98
PHGDH-218ENST00000641491 ZNF25P17030 456 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-218ENST00000641491 OR5A1Q8NGJ0 315 aa8.92□□□□□ -0.98
PHGDH-218ENST00000641491 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 IGHV3-30P01768 117 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 IGHV3-33P01772 117 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HBDP02042 147 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 IGHV3-30-3P0DP02 117 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 IGHV3-30-5P0DP03 117 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 Q9H8V8 135 aa8.91□□□□□ -0.98
PHGDH-218ENST00000641491 ANGP03950 147 aaKnown RBP8.9□□□□□ -0.98
PHGDH-218ENST00000641491 FGF6P10767 208 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 NDUFA6P56556 154 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 C2orf66Q6UXQ4 117 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 WFDC10BQ8IUB3 73 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 C20orf203Q8NBC4 194 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 SPANXA1Q9NS26 97 aa8.9□□□□□ -0.98
PHGDH-218ENST00000641491 IGLV2-18A0A075B6J9 118 aa8.89□□□□□ -0.99
PHGDH-218ENST00000641491 K7EP13 123 aa8.89□□□□□ -0.99
PHGDH-218ENST00000641491 LINC01556Q5JQF7 62 aa8.89□□□□□ -0.99
PHGDH-218ENST00000641491 SCGB3A1Q96QR1 104 aa8.89□□□□□ -0.99
PHGDH-218ENST00000641491 SERF1AO75920 110 aa8.88□□□□□ -0.99
PHGDH-218ENST00000641491 S100A2P29034 98 aa8.88□□□□□ -0.99
PHGDH-218ENST00000641491 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
PHGDH-218ENST00000641491 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
PHGDH-218ENST00000641491 CSMD3Q7Z407 3707 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.87□□□□□ -0.99
PHGDH-218ENST00000641491 ATP5LO75964 103 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 ESDP10768 282 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 RBX1P62877 108 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 MPV17L2Q567V2 206 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 RMI2Q96E14 147 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
PHGDH-218ENST00000641491 IGKV3OR2-268A0A0C4DH90 116 aa8.86□□□□□ -0.99
PHGDH-218ENST00000641491 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
PHGDH-218ENST00000641491 PMCHL1Q16048 86 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms