RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 RPL36AP83881 106 aaKnown RBP12.34□□□□□ -0.43
PHGDH-208ENST00000641023 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 RPL36ALQ969Q0 106 aaKnown RBP12.34□□□□□ -0.43
PHGDH-208ENST00000641023 EREGO14944 169 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 COTL1Q14019 142 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 X6R8D5 127 aa12.34□□□□□ -0.43
PHGDH-208ENST00000641023 NMUP48645 174 aa12.33□□□□□ -0.44
PHGDH-208ENST00000641023 TCTAP57738 103 aa12.33□□□□□ -0.44
PHGDH-208ENST00000641023 PHLDA1Q8WV24 401 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-208ENST00000641023 CST9LQ9H4G1 147 aa12.32□□□□□ -0.44
PHGDH-208ENST00000641023 IGHV3-38A0A0C4DH36 116 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 BOD1L2Q8IYS8 172 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 C2orf88Q9BSF0 95 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 TP73-AS1Q9UF72 201 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 DEFB135Q30KP9 77 aa12.31□□□□□ -0.44
PHGDH-208ENST00000641023 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
PHGDH-208ENST00000641023 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
PHGDH-208ENST00000641023 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 DLEU1O43261 78 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 FGF6P10767 208 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 BATFQ16520 125 aa12.3□□□□□ -0.44
PHGDH-208ENST00000641023 FBN1P35555 2871 aaKnown RBP12.29□□□□□ -0.44
PHGDH-208ENST00000641023 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
PHGDH-208ENST00000641023 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
PHGDH-208ENST00000641023 NPSP0C0P6 89 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 OPRPNQ99935 248 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-208ENST00000641023 VCX2Q9H322 139 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 IGKV2D-26A0A0A0MRZ7 120 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 GAGE12JA6NER3 117 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 GAGE1Q13065 139 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 GAGE4Q13068 117 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 GAGE5Q13069 117 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 PCP2Q8IVA1 136 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 OR11H2Q8NH07 326 aa12.28□□□□□ -0.44
PHGDH-208ENST00000641023 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.45
PHGDH-208ENST00000641023 CRYBA4P53673 196 aa12.27□□□□□ -0.45
PHGDH-208ENST00000641023 UBE2D3P61077 147 aa12.27□□□□□ -0.45
PHGDH-208ENST00000641023 UBE2D2P62837 147 aa12.27□□□□□ -0.45
PHGDH-208ENST00000641023 FHL2Q14192 279 aa12.27□□□□□ -0.45
PHGDH-208ENST00000641023 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 LYRM9A8MSI8 78 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 SIVA1O15304 175 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 PRADC1Q9BSG0 188 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 SPANXA1Q9NS26 97 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 HINT1P49773 126 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-208ENST00000641023 UBE2D4Q9Y2X8 147 aa12.26□□□□□ -0.45
PHGDH-208ENST00000641023 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-208ENST00000641023 IGKV2-29A2NJV5 120 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-208ENST00000641023 TMEM97Q5BJF2 176 aa12.25□□□□□ -0.45
PHGDH-208ENST00000641023 C2orf91Q6ZV80 131 aa12.25□□□□□ -0.45
PHGDH-208ENST00000641023 EGFEM1PQ0D2K5 195 aa12.25□□□□□ -0.45
PHGDH-208ENST00000641023 C11orf86A6NJI1 115 aa12.24□□□□□ -0.45
PHGDH-208ENST00000641023 MIFP14174 115 aa12.24□□□□□ -0.45
PHGDH-208ENST00000641023 MPV17L2Q567V2 206 aa12.24□□□□□ -0.45
PHGDH-208ENST00000641023 STAB1Q9NY15 2570 aa12.24□□□□□ -0.45
PHGDH-208ENST00000641023 FAM222AQ5U5X8 452 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 CEMP1Q6PRD7 247 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-208ENST00000641023 RNF183Q96D59 192 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 KRTAP10-11P60412 298 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 COL5A1-AS1Q5SY13 56 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 AMELXQ99217 191 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
PHGDH-208ENST00000641023 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 E9PLD3 99 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 HERVK_113P61574 105 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 NFE4Q86UQ8 179 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
PHGDH-208ENST00000641023 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
PHGDH-208ENST00000641023 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
PHGDH-208ENST00000641023 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
PHGDH-208ENST00000641023 CHAC1Q9BUX1 264 aa12.21□□□□□ -0.45
PHGDH-208ENST00000641023 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
PHGDH-208ENST00000641023 NBEAL2Q6ZNJ1 2754 aa12.21□□□□□ -0.46
PHGDH-208ENST00000641023 MAST4O15021 2626 aa12.21□□□□□ -0.46
PHGDH-208ENST00000641023 SMAGPQ0VAQ4 97 aa12.2□□□□□ -0.46
PHGDH-208ENST00000641023 A0A1B0GV90 55 aa12.2□□□□□ -0.46
PHGDH-208ENST00000641023 A8MZ25 164 aa12.2□□□□□ -0.46
PHGDH-208ENST00000641023 DEFB4AO15263 64 aa12.2□□□□□ -0.46
PHGDH-208ENST00000641023 Q8NAQ8 132 aa12.2□□□□□ -0.46
PHGDH-208ENST00000641023 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
PHGDH-208ENST00000641023 BVES-AS1Q5T3Y7 98 aa12.18□□□□□ -0.46
PHGDH-208ENST00000641023 HIGD1BQ9P298 99 aa12.18□□□□□ -0.46
PHGDH-208ENST00000641023 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
PHGDH-208ENST00000641023 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
PHGDH-208ENST00000641023 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
PHGDH-208ENST00000641023 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms