RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 C11orf45Q8TAV5 145 aa8.42□□□□□ -1.06
ERGIC3-220ENST00000640748 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
ERGIC3-220ENST00000640748 TRBV27A0A0K0K1C4 114 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 DEFB4AO15263 64 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 PKIAP61925 76 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 VAMP8Q9BV40 100 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 TNFRSF18Q9Y5U5 241 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
ERGIC3-220ENST00000640748 GAGE12BA1L429 117 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 TSTD3H0UI37 97 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 H0Y8G0 127 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 I3L3M4 83 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 GAGE7O76087 117 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 GAGE12FP0CL80 117 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 GAGE12GP0CL81 117 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 GAGE12IP0CL82 117 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 LINC01545Q5VT33 79 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 TOMM6Q96B49 74 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 C18orf15Q96N68 181 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 X6R8D5 127 aa8.4□□□□□ -1.06
ERGIC3-220ENST00000640748 DNAH2Q9P225 4427 aa8.4□□□□□ -1.07
ERGIC3-220ENST00000640748 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 RHOHQ15669 191 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 Q6ZSN1 163 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 Q8NAQ8 132 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 PRO1933Q9H354 126 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 APLNQ9ULZ1 77 aa8.39□□□□□ -1.07
ERGIC3-220ENST00000640748 P0DMU3 169 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 FAM231AP0DMU4 169 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 FAM231CP0DMU5 169 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 C2orf66Q6UXQ4 117 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 ZNF479Q96JC4 524 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 SCGB3A1Q96QR1 104 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 CYSLTR1Q9Y271 337 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 PAM16Q9Y3D7 125 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 PKHD1P08F94 4074 aa8.38□□□□□ -1.07
ERGIC3-220ENST00000640748 DNAH17Q9UFH2 4485 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 K7EQD1 137 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 PRSS1P07477 247 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 EMP1P54849 157 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 TCTAP57738 103 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 Q6ZN92 141 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 DYNC1H1Q14204 4646 aaKnown RBP8.37□□□□□ -1.07
ERGIC3-220ENST00000640748 TSHBP01222 138 aa8.36□□□□□ -1.07
ERGIC3-220ENST00000640748 MIFP14174 115 aa8.36□□□□□ -1.07
ERGIC3-220ENST00000640748 SPATA45Q537H7 98 aa8.36□□□□□ -1.07
ERGIC3-220ENST00000640748 LINC00612Q8N6U2 182 aa8.36□□□□□ -1.07
ERGIC3-220ENST00000640748 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 TRGV4A0A0C4DH28 118 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 LYRM9A8MSI8 78 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 IGLL5B9A064 214 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 HSBP1L1C9JCN9 74 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 ERASQ7Z444 233 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
ERGIC3-220ENST00000640748 DNAH11Q96DT5 4516 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 A0A1B0GVY2 172 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 DEFB104AQ8WTQ1 72 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
ERGIC3-220ENST00000640748 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 A0A087WX48 190 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 COTL1Q14019 142 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 ODF1Q14990 250 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 FAM222AQ5U5X8 452 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 Q6ZTC4 211 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 C20orf203Q8NBC4 194 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 Q9UF83 564 aa8.33□□□□□ -1.08
ERGIC3-220ENST00000640748 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 DEFB130BP0DP73 79 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 DEFB130AP0DP74 79 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 DDTP30046 118 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 RPL39P62891 51 aaKnown RBP8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 FHL2Q14192 279 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 PRADC1Q9BSG0 188 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 DKK2Q9UBU2 259 aa8.32□□□□□ -1.08
ERGIC3-220ENST00000640748 IGHV3-38A0A0C4DH36 116 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 DPM2O94777 84 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 IGKCP01834 107 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 UBE2D3P61077 147 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 UBE2D2P62837 147 aa8.31□□□□□ -1.08
ERGIC3-220ENST00000640748 GAGE1Q13065 139 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms