RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 ZNF843Q8N446 348 aa6.75□□□□□ -1.33
PAX6-259ENST00000639916 AGPAT4-IT1Q9H0P7 198 aa6.75□□□□□ -1.33
PAX6-259ENST00000639916 G3V318 75 aa6.75□□□□□ -1.33
PAX6-259ENST00000639916 LST1O00453 97 aa6.75□□□□□ -1.33
PAX6-259ENST00000639916 RHOHQ15669 191 aa6.75□□□□□ -1.33
PAX6-259ENST00000639916 FAM110DQ8TAY7 271 aaPredicted RBP6.75□□□□□ -1.33
PAX6-259ENST00000639916 C15orf32Q32M92 178 aa6.74□□□□□ -1.33
PAX6-259ENST00000639916 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
PAX6-259ENST00000639916 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
PAX6-259ENST00000639916 IGHV4-38-2P0DP08 117 aa6.74□□□□□ -1.33
PAX6-259ENST00000639916 POLQO75417 2590 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 MSMBP08118 114 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 LGALS3P17931 250 aaKnown RBP6.73□□□□□ -1.33
PAX6-259ENST00000639916 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
PAX6-259ENST00000639916 ZNF415Q09FC8 603 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 PAPPA-AS1Q5QFB9 102 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.73□□□□□ -1.33
PAX6-259ENST00000639916 IGHV3OR16-8A0A075B7F1 116 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 TSHBP01222 138 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 COX6CP09669 75 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
PAX6-259ENST00000639916 PDE6HQ13956 83 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 SERP2Q8N6R1 65 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 MOB4Q9Y3A3 225 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 V9GYY9 64 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 ABCA12Q86UK0 2595 aa6.73□□□□□ -1.33
PAX6-259ENST00000639916 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
PAX6-259ENST00000639916 DOPEY2Q9Y3R5 2298 aa6.72□□□□□ -1.33
PAX6-259ENST00000639916 RNF223E7ERA6 249 aa6.72□□□□□ -1.33
PAX6-259ENST00000639916 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
PAX6-259ENST00000639916 SETXQ7Z333 2677 aaKnown RBP6.71□□□□□ -1.33
PAX6-259ENST00000639916 IGKV3D-20A0A0C4DH25 116 aa6.71□□□□□ -1.33
PAX6-259ENST00000639916 B4DSR2 109 aa6.71□□□□□ -1.33
PAX6-259ENST00000639916 LY6EQ16553 131 aa6.71□□□□□ -1.33
PAX6-259ENST00000639916 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.33
PAX6-259ENST00000639916 NOTCH2Q04721 2471 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 FAM236CP0DP71 79 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 DSCR9P59020 149 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 CLEC19AQ6UXS0 136 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.34
PAX6-259ENST00000639916 IGHV7-4-1A0A0J9YVY3 117 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 Q6ZSV7 163 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 RPL39LQ96EH5 51 aaKnown RBP6.7□□□□□ -1.34
PAX6-259ENST00000639916 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 H3BUX3 64 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 I3L3M4 83 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 AVPP01185 164 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 IGFL4Q6B9Z1 124 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 ANKRD17O75179 2603 aaKnown RBP6.7□□□□□ -1.34
PAX6-259ENST00000639916 PTPN13Q12923 2485 aa6.7□□□□□ -1.34
PAX6-259ENST00000639916 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
PAX6-259ENST00000639916 ZNF469Q96JG9 3925 aaPredicted RBP6.69□□□□□ -1.34
PAX6-259ENST00000639916 FHL2Q14192 279 aa6.69□□□□□ -1.34
PAX6-259ENST00000639916 SPANXN1Q5VSR9 72 aa6.69□□□□□ -1.34
PAX6-259ENST00000639916 SMAD5-AS1Q9Y6J3 95 aa6.69□□□□□ -1.34
PAX6-259ENST00000639916 IGIPA6NJ69 53 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 PRSS2P07478 247 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 ZFAND3Q9H8U3 227 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 A6NDX4 124 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 LEPROTO15243 131 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 SYNJ2BPP57105 145 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 C19orf54Q5BKX5 351 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 APCP25054 2843 aa6.68□□□□□ -1.34
PAX6-259ENST00000639916 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGHV3OR16-13A0A075B7E8 117 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGHV3-74A0A0B4J1X5 117 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 BUB3O43684 328 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 BLCAPP62952 87 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 LINC01356Q8N9X3 169 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 MAPK1IP1LQ8NDC0 245 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 TP53TG1Q9Y2A0 90 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGHV3-64A0A075B6Q5 118 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 A0A0J9YXY3 114 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 CLPSL1A2RUU4 121 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 FAM223BA6NKX1 122 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGF1P05019 195 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 NPC2P61916 151 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 ZNF876PQ49A33 203 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 FAM223AQ8IWN6 122 aa6.67□□□□□ -1.34
PAX6-259ENST00000639916 PRRC2AP48634 2157 aaKnown RBP6.67□□□□□ -1.34
PAX6-259ENST00000639916 IGHG2P01859 326 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
PAX6-259ENST00000639916 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
PAX6-259ENST00000639916 PRIMA1Q86XR5 153 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 WFDC11Q8NEX6 87 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 LITAFQ99732 161 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 DAZ1Q9NQZ3 744 aaKnown RBP6.66□□□□□ -1.34
PAX6-259ENST00000639916 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
PAX6-259ENST00000639916 NACAE9PAV3 2078 aa6.66□□□□□ -1.34
PAX6-259ENST00000639916 IGHV3-49A0A0A0MS15 119 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms