RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CCL18P55774 89 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TPPP2P59282 170 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MYL6P60660 151 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RPS20P60866 119 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PSME3P61289 254 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PCBD1P61457 104 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 NCALDP61601 193 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RRAS2P62070 204 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 LSM3P62310 102 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 SNRPD2P62316 118 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 BLCAPP62952 87 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 HBBP68871 147 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MED21Q13503 144 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 WRNQ14191 1432 aaPredicted RBP eCLIP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MED1Q15648 1581 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RRN3P1Q2M238 152 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 NMSQ5H8A3 153 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 C10orf113Q5VZT2 155 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 DCUN1D2Q6PH85 259 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 Q6Q795 121 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CROCCP2Q86T23 111 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MORN4Q8NDC4 146 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 OR51D1Q8NGF3 324 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 OR5H6Q8NGV6 325 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CDC26Q8NHZ8 85 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 C10orf82Q8WW14 230 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 AP3S1Q92572 193 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TRPM7Q96QT4 1865 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 GINS3Q9BRX5 216 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 DRC3Q9H069 523 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RNASE7Q9H1E1 156 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 SLC35B3Q9H1N7 401 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PRO1933Q9H354 126 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PRO3102Q9H379 93 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PARVGQ9HBI0 331 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TNS1Q9HBL0 1735 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RPRMQ9NS64 109 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FAIMQ9NVQ4 179 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FKBP11Q9NYL4 201 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TAS2R8Q9NYW2 309 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 COPZ2Q9P299 210 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PYCARDQ9ULZ3 195 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 ASB4Q9Y574 426 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 V9GYQ6 96 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 SIP14410 1827 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 NUP98P52948 1817 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 ECM29Q5VYK3 1845 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CEP350Q5VT06 3117 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 LRP6O75581 1613 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 SHANK2Q9UPX8 1470 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 CCDC171Q6TFL3 1326 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 EVC2Q86UK5 1308 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 PLXNA2O75051 1894 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 DOCK1Q14185 1865 aa-0.35□□□□□ -2.46
CCDC7-211ENST00000638889 ARHGEF5Q12774 1597 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MAP2P11137 1827 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 AFDNP55196 1824 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 XIRP1Q702N8 1843 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 KIF13AQ9H1H9 1805 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MGAQ8IWI9 3026 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 BORCS7-ASMTA0A0B4J1R7 106 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TRAV2A0A0B4J234 112 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TRBV7-7A0A0K0K1E9 115 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 LCE6AA0A183 80 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 A0A1B0GU69 56 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TRDV1A0A1B0GX56 115 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CLPSL1A2RUU4 121 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 EEF1E1-BLOC1S5C9J1V9 151 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 PPP5D1E7EU14 171 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CCDC179H3BU77 68 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 H7C1C5 153 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 M0QZ58 72 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 BANF1O75531 89 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 SNCGO76070 127 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 NDUFA3O95167 84 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 IFNA7P01567 189 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 IFNA14P01570 189 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 IFNA17P01571 189 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TNNC2P02585 160 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CRHP06850 196 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 C8GP07360 202 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 C3orf79P0CE67 100 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 SLC25A4P12235 298 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 HSD11B1P28845 292 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 RPL35P42766 123 aaKnown RBP-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 UBE2D1P51668 147 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CEBPGP53567 150 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 CRYBA4P53673 196 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 MAXP61244 160 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 LCN6P62502 163 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TMED2Q15363 201 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 HSD17B12Q53GQ0 312 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 TMEM78Q5T7P6 136 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 Q6AWC8 147 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 COMMD6Q7Z4G1 85 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 SERP2Q8N6R1 65 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 NUP35Q8NFH5 326 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 SPTSSBQ8NFR3 76 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 OTOSQ8NHW6 89 aa-0.35□□□□□ -2.47
CCDC7-211ENST00000638889 DYNLRB2Q8TF09 96 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms