RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 GNG8Q9UK08 70 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 FOCADQ5VW36 1801 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 F5P12259 2224 aa0.45□□□□□ -2.34
GYPB-216ENST00000638448 EIF4G3O43432 1585 aaKnown RBP0.45□□□□□ -2.34
GYPB-216ENST00000638448 QRICH2Q9H0J4 1663 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 MYO7AQ13402 2215 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 TRBV7-3A0A075B6L6 115 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 G3V318 75 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 NMBP08949 121 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 PPP3R1P63098 170 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 C9orf153Q5TBE3 101 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 AMELXQ99217 191 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 MGST2Q99735 147 aa0.44□□□□□ -2.34
GYPB-216ENST00000638448 MAPKBP1O60336 1514 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 RBBP6Q7Z6E9 1792 aaKnown RBP0.43□□□□□ -2.34
GYPB-216ENST00000638448 FAM24AA6NFZ4 105 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 H3BQ15 152 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 M0R135 149 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 SPINK6Q6UWN8 80 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 SMIM4Q8WVI0 70 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 CGREF1Q99674 301 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 DPH3P1Q9H4G8 78 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 UNC13BO14795 1591 aa0.43□□□□□ -2.34
GYPB-216ENST00000638448 CADP27708 2225 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 GOLGA3Q08378 1498 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 TNS1Q9HBL0 1735 aaKnown RBP0.42□□□□□ -2.34
GYPB-216ENST00000638448 LOC285095A0A1B0GVY8 99 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 SNAPC5O75971 98 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 S100PP25815 95 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 DCDP81605 110 aaKnown RBP0.42□□□□□ -2.34
GYPB-216ENST00000638448 SPAG11BQ08648 103 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 SPAG11AQ6PDA7 123 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 MYOZ3Q8TDC0 251 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 DYNLRB1Q9NP97 96 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 NDUFA4L2Q9NRX3 87 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 CACNA1HO95180 2353 aa0.42□□□□□ -2.34
GYPB-216ENST00000638448 SIPA1L3O60292 1781 aaPredicted RBP0.42□□□□□ -2.34
GYPB-216ENST00000638448 MRC1P22897 1456 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 MYH9P35579 1960 aaKnown RBP0.41□□□□□ -2.34
GYPB-216ENST00000638448 C10orf71Q711Q0 1435 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 IFITM1P13164 125 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 COX6A2Q02221 97 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 CFAP126Q5VTH2 177 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 UBE2DNLQ8IWF7 75 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 SVBPQ8N300 66 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 V9GYH0 126 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 CACNA1EQ15878 2313 aa0.41□□□□□ -2.34
GYPB-216ENST00000638448 MYH7P12883 1935 aa0.4□□□□□ -2.34
GYPB-216ENST00000638448 PIEZO1Q92508 2521 aa0.4□□□□□ -2.34
GYPB-216ENST00000638448 RIMS1Q86UR5 1692 aaKnown RBP0.4□□□□□ -2.34
GYPB-216ENST00000638448 ZNF609O15014 1411 aa0.4□□□□□ -2.34
GYPB-216ENST00000638448 UQCR11O14957 56 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 SPINK8P0C7L1 97 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 COX17Q14061 63 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 DOCK11Q5JSL3 2073 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 NWD2Q9ULI1 1742 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 ABCA12Q86UK0 2595 aa0.4□□□□□ -2.35
GYPB-216ENST00000638448 TTC28Q96AY4 2481 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 C20orf202A1L168 122 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 S100A1P23297 94 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 FAM167A-AS1Q96KT0 104 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 LINC00474Q9P2X8 69 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 LINC01558Q9Y6Z2 57 aa0.39□□□□□ -2.35
GYPB-216ENST00000638448 PARP14Q460N5 1801 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 SPEF2Q9C093 1822 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 PZPP20742 1482 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 A0A0D9SFI3 127 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 F8VRH5 84 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 HMGN4O00479 90 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 BAGE2Q86Y30 109 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 TCEAL7Q9BRU2 100 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 CNFNQ9BYD5 112 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 CDC42SE2Q9NRR3 84 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 PI4KAP42356 2102 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 ARAP2Q8WZ64 1704 aa0.38□□□□□ -2.35
GYPB-216ENST00000638448 TPRP12270 2363 aaKnown RBP0.38□□□□□ -2.35
GYPB-216ENST00000638448 PEG3Q9GZU2 1588 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 CTXND1A0A1B0GTU2 59 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 TMEM262E9PQX1 116 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 APOC3P02656 99 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 HSD52Q0P140 79 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 GTF2H5Q6ZYL4 71 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 LINC00472Q9H8W2 130 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 USP24Q9UPU5 2620 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 POLQO75417 2590 aa0.37□□□□□ -2.35
GYPB-216ENST00000638448 ASXL3Q9C0F0 2248 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 IGLC7A0M8Q6 106 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 ZNF815PA8K554 130 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 SSBP3-AS1Q7Z2R9 100 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 TSLPQ969D9 159 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 UQCR10Q9UDW1 63 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 F8P00451 2351 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 SCAPERQ9BY12 1400 aa0.36□□□□□ -2.35
GYPB-216ENST00000638448 SYNE1Q8NF91 8797 aaKnown RBP0.36□□□□□ -2.35
GYPB-216ENST00000638448 NAP1L6A6NFF2 107 aa0.35□□□□□ -2.35
GYPB-216ENST00000638448 TMEM170BQ5T4T1 132 aa0.35□□□□□ -2.35
GYPB-216ENST00000638448 NRKQ7Z2Y5 1582 aa0.35□□□□□ -2.35
GYPB-216ENST00000638448 FAM208BQ5VWN6 2430 aa0.35□□□□□ -2.35
GYPB-216ENST00000638448 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms