RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 S100A1P23297 94 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 FABP9Q0Z7S8 132 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 SMIM2Q9BVW6 85 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 KRTAP1-5Q9BYS1 174 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 TRAPPC1Q9Y5R8 145 aa13.2□□□□□ -0.3
HLA-A-209ENST00000638375 RYR3Q15413 4870 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 TRBV25-1A0A075B6N4 114 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 M0R2N4 97 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 Q6ZR54 194 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 NIT1Q86X76 327 aa13.19□□□□□ -0.3
HLA-A-209ENST00000638375 AMTP48728 403 aa13.18□□□□□ -0.3
HLA-A-209ENST00000638375 LINC01556Q5JQF7 62 aa13.18□□□□□ -0.3
HLA-A-209ENST00000638375 CHCHD5Q9BSY4 110 aa13.18□□□□□ -0.3
HLA-A-209ENST00000638375 COLCA2A8K830 154 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 PRSS47A8MTI9 375 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 IGHV3-30-3P0DP02 117 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 ALKBH7Q9BT30 221 aaPredicted RBP13.17□□□□□ -0.3
HLA-A-209ENST00000638375 TMEM243Q9BU79 118 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 CHCHD7Q9BUK0 85 aa13.17□□□□□ -0.3
HLA-A-209ENST00000638375 LOC389332A0A1B0GUA5 103 aa13.16□□□□□ -0.3
HLA-A-209ENST00000638375 GAGE6Q13070 117 aa13.16□□□□□ -0.3
HLA-A-209ENST00000638375 MAP1LC3AQ9H492 121 aa13.16□□□□□ -0.3
HLA-A-209ENST00000638375 KIR2DL4Q99706 377 aa13.15□□□□□ -0.3
HLA-A-209ENST00000638375 TMEM262E9PQX1 116 aa13.14□□□□□ -0.31
HLA-A-209ENST00000638375 ESDP10768 282 aa13.14□□□□□ -0.31
HLA-A-209ENST00000638375 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
HLA-A-209ENST00000638375 TTC32Q5I0X7 151 aa13.14□□□□□ -0.31
HLA-A-209ENST00000638375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
HLA-A-209ENST00000638375 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
HLA-A-209ENST00000638375 FCER1GP30273 86 aa13.13□□□□□ -0.31
HLA-A-209ENST00000638375 A0A087WX48 190 aa13.12□□□□□ -0.31
HLA-A-209ENST00000638375 TCAPO15273 167 aa13.12□□□□□ -0.31
HLA-A-209ENST00000638375 Q8N8P6 123 aa13.12□□□□□ -0.31
HLA-A-209ENST00000638375 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
HLA-A-209ENST00000638375 RAB5AP20339 215 aa13.11□□□□□ -0.31
HLA-A-209ENST00000638375 PKIAP61925 76 aa13.11□□□□□ -0.31
HLA-A-209ENST00000638375 RBX1P62877 108 aa13.11□□□□□ -0.31
HLA-A-209ENST00000638375 Q8N976 141 aa13.11□□□□□ -0.31
HLA-A-209ENST00000638375 K7EP13 123 aa13.1□□□□□ -0.31
HLA-A-209ENST00000638375 UBE2L6O14933 153 aa13.1□□□□□ -0.31
HLA-A-209ENST00000638375 IFI27P40305 119 aaPredicted RBP13.1□□□□□ -0.31
HLA-A-209ENST00000638375 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
HLA-A-209ENST00000638375 H7C423 109 aa13.09□□□□□ -0.31
HLA-A-209ENST00000638375 TRGC2P03986 189 aa13.09□□□□□ -0.31
HLA-A-209ENST00000638375 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
HLA-A-209ENST00000638375 DNAH2Q9P225 4427 aa13.08□□□□□ -0.31
HLA-A-209ENST00000638375 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
HLA-A-209ENST00000638375 C18orf32Q8TCD1 76 aa13.08□□□□□ -0.32
HLA-A-209ENST00000638375 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
HLA-A-209ENST00000638375 IGLV4-60A0A075B6I1 120 aa13.07□□□□□ -0.32
HLA-A-209ENST00000638375 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
HLA-A-209ENST00000638375 FGF6P10767 208 aa13.07□□□□□ -0.32
HLA-A-209ENST00000638375 C20orf203Q8NBC4 194 aa13.07□□□□□ -0.32
HLA-A-209ENST00000638375 C6orf223Q8N319 242 aa13.06□□□□□ -0.32
HLA-A-209ENST00000638375 ANGP03950 147 aaKnown RBP13.05□□□□□ -0.32
HLA-A-209ENST00000638375 LAGE3Q14657 143 aa13.05□□□□□ -0.32
HLA-A-209ENST00000638375 AMMECR1LQ6DCA0 310 aa13.05□□□□□ -0.32
HLA-A-209ENST00000638375 RNASEKQ6P5S7 137 aaKnown RBP13.05□□□□□ -0.32
HLA-A-209ENST00000638375 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
HLA-A-209ENST00000638375 DNAH10Q8IVF4 4471 aa13.05□□□□□ -0.32
HLA-A-209ENST00000638375 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
HLA-A-209ENST00000638375 C1orf134Q5TEV5 83 aa13.04□□□□□ -0.32
HLA-A-209ENST00000638375 MRPL52Q86TS9 123 aaKnown RBP13.04□□□□□ -0.32
HLA-A-209ENST00000638375 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 K7EMI3 77 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 ZNF25P17030 456 aaPredicted RBP13.03□□□□□ -0.32
HLA-A-209ENST00000638375 BTF3P20290 206 aaKnown RBP13.03□□□□□ -0.32
HLA-A-209ENST00000638375 ORMDL2Q53FV1 153 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 UBE2WQ96B02 151 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 URB1-AS1Q96HZ7 61 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 UBE2D4Q9Y2X8 147 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 FRAS1Q86XX4 4008 aa13.03□□□□□ -0.32
HLA-A-209ENST00000638375 RTL8CO15255 209 aa13.02□□□□□ -0.33
HLA-A-209ENST00000638375 ENHOQ6UWT2 76 aa13.02□□□□□ -0.33
HLA-A-209ENST00000638375 Q6ZRN7 208 aaPredicted RBP13.02□□□□□ -0.33
HLA-A-209ENST00000638375 LINC00269Q8N2A0 174 aa13.02□□□□□ -0.33
HLA-A-209ENST00000638375 TMEM18Q96B42 140 aa13.02□□□□□ -0.33
HLA-A-209ENST00000638375 Q9HAA7 133 aa13.02□□□□□ -0.33
HLA-A-209ENST00000638375 CLPSL2Q6UWE3 100 aa13.01□□□□□ -0.33
HLA-A-209ENST00000638375 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
HLA-A-209ENST00000638375 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
HLA-A-209ENST00000638375 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
HLA-A-209ENST00000638375 TIMM21Q9BVV7 248 aa13□□□□□ -0.33
HLA-A-209ENST00000638375 DNAH17Q9UFH2 4485 aa13□□□□□ -0.33
HLA-A-209ENST00000638375 TRAV8-3A0A0A6YYJ7 113 aa12.99□□□□□ -0.33
HLA-A-209ENST00000638375 CRPP02741 224 aa12.99□□□□□ -0.33
HLA-A-209ENST00000638375 REG3AQ06141 175 aa12.99□□□□□ -0.33
HLA-A-209ENST00000638375 C2orf66Q6UXQ4 117 aa12.99□□□□□ -0.33
HLA-A-209ENST00000638375 TMEM101Q96IK0 257 aa12.99□□□□□ -0.33
HLA-A-209ENST00000638375 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
HLA-A-209ENST00000638375 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
HLA-A-209ENST00000638375 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
HLA-A-209ENST00000638375 FAM104AQ969W3 186 aa12.98□□□□□ -0.33
HLA-A-209ENST00000638375 CDC42SE2Q9NRR3 84 aa12.98□□□□□ -0.33
HLA-A-209ENST00000638375 SPANXA1Q9NS26 97 aa12.98□□□□□ -0.33
HLA-A-209ENST00000638375 CYSLTR1Q9Y271 337 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms