RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 PHLDA1Q8WV24 401 aaPredicted RBP4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 BAALCQ8WXS3 180 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 SPANXA1Q9NS26 97 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 MRPL35Q9NZE8 188 aaKnown RBP4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
CACNA1D-227ENST00000637844 WNK1Q9H4A3 2382 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 IGHV4-28A0A0C4DH34 117 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 IGHV3-38A0A0C4DH36 116 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 GAGE12JA6NER3 117 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 CRYBA4P53673 196 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 HERVK_113P61574 105 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 DAD1P61803 113 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 RPL39P62891 51 aaKnown RBP4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 GAGE1Q13065 139 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 GAGE4Q13068 117 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 GAGE5Q13069 117 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 GAGE13Q4V321 117 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 FAM222AQ5U5X8 452 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 LINC00612Q8N6U2 182 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 C14orf144Q96I85 54 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 C2orf88Q9BSF0 95 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 VCX2Q9H322 139 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 HHLA3Q9XRX5 114 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
CACNA1D-227ENST00000637844 PRSS29PA6NIE9 313 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 M0R143 59 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 COX8AP10176 69 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 NMUP48645 174 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 KRTAP10-11P60412 298 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 UBE2D3P61077 147 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 UBE2D2P62837 147 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 FHL2Q14192 279 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 LBHQ53QV2 105 aaPredicted RBP4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 ZC2HC1BQ5TFG8 222 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 GTSF1LQ9H1H1 148 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 CST9LQ9H4G1 147 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 NF1P21359 2839 aa4.48□□□□□ -1.69
CACNA1D-227ENST00000637844 TRBV25-1A0A075B6N4 114 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 IGKV2-29A2NJV5 120 aaPredicted RBP4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 G3V4G9 280 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 H7C423 109 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 ATP5G1P05496 136 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 SAMD5Q5TGI4 173 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 AMMECR1LQ6DCA0 310 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 STPG4Q8N801 248 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 TMEM243Q9BU79 118 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 CHCHD7Q9BUK0 85 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 MRPS16Q9Y3D3 137 aaKnown RBP4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 NACAE9PAV3 2078 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 F8P00451 2351 aa4.47□□□□□ -1.69
CACNA1D-227ENST00000637844 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 SIVA1O15304 175 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 DLEU1O43261 78 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 PAX4O43316 350 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 GYPEP15421 78 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 CTAG1AP78358 180 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 MRPS36P82909 103 aaKnown RBP4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 ANKRD39Q53RE8 183 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 Q8NAQ8 132 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 OR5A1Q8NGJ0 315 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 UBE2D4Q9Y2X8 147 aa4.46□□□□□ -1.7
CACNA1D-227ENST00000637844 SORL1Q92673 2214 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 C11orf86A6NJI1 115 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 DEFB4AO15263 64 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 FGF6P10767 208 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 ZNF25P17030 456 aaPredicted RBP4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 SEC11AP67812 179 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 SH2D6Q7Z4S9 175 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 NFE4Q86UQ8 179 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 ATP6V0E2Q8NHE4 81 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 Q9UF83 564 aa4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
CACNA1D-227ENST00000637844 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 TRBV6-8A0A0A6YYG3 113 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 LOC100131303A0A0U1RQF7 123 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 E9PLD3 99 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 F5H768 121 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 H3BRM9 83 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 HTN3P15516 51 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 TCTAP57738 103 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 BATFQ16520 125 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 AMELXQ99217 191 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 SPATA25Q9BR10 227 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 CHCHD5Q9BSY4 110 aa4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 C11orf68Q9H3H3 251 aaKnown RBP4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
CACNA1D-227ENST00000637844 TRAV26-1A0A087WT03 109 aa4.43□□□□□ -1.7
CACNA1D-227ENST00000637844 TRAV8-6A0A0B4J262 113 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms