RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 TRAV12-1A0A0B4J245 112 aa15.4■□□□□ 0.06
CHRNA7-228ENST00000637519 PRSS29PA6NIE9 313 aa15.4■□□□□ 0.06
CHRNA7-228ENST00000637519 CHTOPQ9Y3Y2 248 aaKnown RBP15.4■□□□□ 0.06
CHRNA7-228ENST00000637519 APOC4P55056 127 aa15.4■□□□□ 0.06
CHRNA7-228ENST00000637519 LOC100131303A0A0U1RQF7 123 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 F8VRH5 84 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 COL6A5A8TX70 2615 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 IGKV2D-26A0A0A0MRZ7 120 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 G0S2P27469 103 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 NMUP48645 174 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 CEMP1Q6PRD7 247 aaPredicted RBP15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 KIR2DL5BQ8NHK3 375 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 DNAJC30Q96LL9 226 aa15.39■□□□□ 0.05
CHRNA7-228ENST00000637519 GAGE12JA6NER3 117 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 GAGE1Q13065 139 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 GAGE4Q13068 117 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 GAGE5Q13069 117 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 GAGE13Q4V321 117 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 SLC25A34Q6PIV7 304 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 TIMM17AQ99595 171 aa15.38■□□□□ 0.05
CHRNA7-228ENST00000637519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.37■□□□□ 0.05
CHRNA7-228ENST00000637519 IGKV2-29A2NJV5 120 aaPredicted RBP15.37■□□□□ 0.05
CHRNA7-228ENST00000637519 CHCHD7Q9BUK0 85 aa15.37■□□□□ 0.05
CHRNA7-228ENST00000637519 OR11H2Q8NH07 326 aa15.37■□□□□ 0.05
CHRNA7-228ENST00000637519 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 COX8AP10176 69 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 BATFQ16520 125 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 PCP2Q8IVA1 136 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 TMEM141Q96I45 108 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 TTTY13Q9BZ97 58 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 TRGV4A0A0C4DH28 118 aa15.36■□□□□ 0.05
CHRNA7-228ENST00000637519 FGF6P10767 208 aa15.35■□□□□ 0.05
CHRNA7-228ENST00000637519 CST9LQ9H4G1 147 aa15.35■□□□□ 0.05
CHRNA7-228ENST00000637519 PLNP26678 52 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 RPL36AP83881 106 aaKnown RBP15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 COTL1Q14019 142 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 PMVKQ15126 192 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 RPL36ALQ969Q0 106 aaKnown RBP15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 IGLV4-69A0A075B6H9 119 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 IGHV4-28A0A0C4DH34 117 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 FHL2Q14192 279 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 RNASE13Q5GAN3 156 aaKnown RBP15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 FAM222AQ5U5X8 452 aa15.34■□□□□ 0.05
CHRNA7-228ENST00000637519 IGLV4-3A0A075B6K6 122 aa15.33■□□□□ 0.04
CHRNA7-228ENST00000637519 G3V4G9 280 aa15.33■□□□□ 0.04
CHRNA7-228ENST00000637519 M0R143 59 aa15.33■□□□□ 0.04
CHRNA7-228ENST00000637519 FAM104AQ969W3 186 aa15.33■□□□□ 0.04
CHRNA7-228ENST00000637519 TRBV10-1A0A0K0K1A3 114 aa15.32■□□□□ 0.04
CHRNA7-228ENST00000637519 SMIM9A6NGZ8 99 aa15.32■□□□□ 0.04
CHRNA7-228ENST00000637519 LINC01549A6NIU2 74 aa15.32■□□□□ 0.04
CHRNA7-228ENST00000637519 LINC00612Q8N6U2 182 aa15.32■□□□□ 0.04
CHRNA7-228ENST00000637519 C11orf86A6NJI1 115 aa15.31■□□□□ 0.04
CHRNA7-228ENST00000637519 UBE2D3P61077 147 aa15.31■□□□□ 0.04
CHRNA7-228ENST00000637519 UBE2D2P62837 147 aa15.31■□□□□ 0.04
CHRNA7-228ENST00000637519 NTM-AS1Q6ZSK4 140 aa15.31■□□□□ 0.04
CHRNA7-228ENST00000637519 C2orf91Q6ZV80 131 aa15.31■□□□□ 0.04
CHRNA7-228ENST00000637519 ANK2Q01484 3957 aa15.3■□□□□ 0.04
CHRNA7-228ENST00000637519 HINT1P49773 126 aaPredicted RBP15.3■□□□□ 0.04
CHRNA7-228ENST00000637519 EGFEM1PQ0D2K5 195 aa15.3■□□□□ 0.04
CHRNA7-228ENST00000637519 MRPS16Q9Y3D3 137 aaKnown RBP15.3■□□□□ 0.04
CHRNA7-228ENST00000637519 TRBV6-4A0A1B0GX49 114 aa15.29■□□□□ 0.04
CHRNA7-228ENST00000637519 UBE2D4Q9Y2X8 147 aa15.29■□□□□ 0.04
CHRNA7-228ENST00000637519 Q8NAQ8 132 aa15.29■□□□□ 0.04
CHRNA7-228ENST00000637519 CELA1Q9UNI1 258 aa15.29■□□□□ 0.04
CHRNA7-228ENST00000637519 BOD1L2Q8IYS8 172 aa15.28■□□□□ 0.04
CHRNA7-228ENST00000637519 RETNQ9HD89 108 aa15.28■□□□□ 0.04
CHRNA7-228ENST00000637519 RNF183Q96D59 192 aa15.28■□□□□ 0.04
CHRNA7-228ENST00000637519 LINC00694P0DN24 101 aa15.27■□□□□ 0.03
CHRNA7-228ENST00000637519 Q6ZUT4 128 aa15.26■□□□□ 0.03
CHRNA7-228ENST00000637519 DAZ4Q86SG3 579 aaKnown RBP15.26■□□□□ 0.03
CHRNA7-228ENST00000637519 DAZ3Q9NR90 486 aaKnown RBP15.26■□□□□ 0.03
CHRNA7-228ENST00000637519 VCX2Q9H322 139 aa15.26■□□□□ 0.03
CHRNA7-228ENST00000637519 PYGO1Q9Y3Y4 419 aa15.26■□□□□ 0.03
CHRNA7-228ENST00000637519 TRAV8-6A0A0B4J262 113 aa15.25■□□□□ 0.03
CHRNA7-228ENST00000637519 C2orf88Q9BSF0 95 aa15.25■□□□□ 0.03
CHRNA7-228ENST00000637519 CIDEAO60543 219 aa15.24■□□□□ 0.03
CHRNA7-228ENST00000637519 MPV17L2Q567V2 206 aa15.24■□□□□ 0.03
CHRNA7-228ENST00000637519 MAPKAPK5-AS1Q8N8E1 139 aa15.24■□□□□ 0.03
CHRNA7-228ENST00000637519 PRADC1Q9BSG0 188 aa15.24■□□□□ 0.03
CHRNA7-228ENST00000637519 CHAC1Q9BUX1 264 aa15.24■□□□□ 0.03
CHRNA7-228ENST00000637519 A0A0J9YXV3 536 aa15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 LYRM9A8MSI8 78 aa15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 A0A1B0GV90 55 aa15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 MIFP14174 115 aa15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 TMEM170BQ5T4T1 132 aa15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 MRPL52Q86TS9 123 aaKnown RBP15.23■□□□□ 0.03
CHRNA7-228ENST00000637519 AMELXQ99217 191 aa15.22■□□□□ 0.03
CHRNA7-228ENST00000637519 SPANXA1Q9NS26 97 aa15.22■□□□□ 0.03
CHRNA7-228ENST00000637519 PRB2P02812 416 aaPredicted RBP15.21■□□□□ 0.03
CHRNA7-228ENST00000637519 GYPEP15421 78 aa15.2■□□□□ 0.02
CHRNA7-228ENST00000637519 CRYBA4P53673 196 aa15.2■□□□□ 0.02
CHRNA7-228ENST00000637519 DAD1P61803 113 aa15.2■□□□□ 0.02
CHRNA7-228ENST00000637519 SBSPONQ8IVN8 264 aa15.2■□□□□ 0.02
CHRNA7-228ENST00000637519 DNAH3Q8TD57 4116 aa15.19■□□□□ 0.02
CHRNA7-228ENST00000637519 NOTCH1P46531 2555 aa15.19■□□□□ 0.02
CHRNA7-228ENST00000637519 A0A096LPF7 62 aa15.19■□□□□ 0.02
CHRNA7-228ENST00000637519 DLEU1O43261 78 aa15.19■□□□□ 0.02
CHRNA7-228ENST00000637519 A0A0J9YY99 117 aa15.18■□□□□ 0.02
CHRNA7-228ENST00000637519 E9PLD3 99 aa15.18■□□□□ 0.02
CHRNA7-228ENST00000637519 LBHQ53QV2 105 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms