RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SPATA12Q7Z6I5 190 aa10.81□□□□□ -0.68
CLN6-219ENST00000637329 LINC00518Q8N0U6 118 aa10.81□□□□□ -0.68
CLN6-219ENST00000637329 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
CLN6-219ENST00000637329 ZMAT4Q9H898 229 aa10.81□□□□□ -0.68
CLN6-219ENST00000637329 SYS1-DBNDD2H3BUS1 97 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 PET117Q6UWS5 81 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 IFI27L1Q96BM0 104 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 Q9UF83 564 aa10.8□□□□□ -0.68
CLN6-219ENST00000637329 GAGE12JA6NER3 117 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 GAGE1Q13065 139 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 GAGE4Q13068 117 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 GAGE5Q13069 117 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 GAGE13Q4V321 117 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 C20orf203Q8NBC4 194 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 C12orf57Q99622 126 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
CLN6-219ENST00000637329 A0A0J9YWU9 116 aa10.78□□□□□ -0.68
CLN6-219ENST00000637329 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.78□□□□□ -0.68
CLN6-219ENST00000637329 SCGB1D1O95968 90 aa10.78□□□□□ -0.68
CLN6-219ENST00000637329 ERASQ7Z444 233 aa10.78□□□□□ -0.68
CLN6-219ENST00000637329 TRAV26-1A0A087WT03 109 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 PAX4O43316 350 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 NPSP0C0P6 89 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 C12orf74Q32Q52 190 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 Q8N976 141 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.69
CLN6-219ENST00000637329 TMEM141Q96I45 108 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 SCGB3A1Q96QR1 104 aa10.77□□□□□ -0.69
CLN6-219ENST00000637329 LOC100131303A0A0U1RQF7 123 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 H3BNG1 76 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 GYPEP15421 78 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 LGALS9CQ6DKI2 356 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 CHCHD7Q9BUK0 85 aa10.76□□□□□ -0.69
CLN6-219ENST00000637329 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 F5H768 121 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 SMAGPQ0VAQ4 97 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 Q6ZN92 141 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 SPANXA1Q9NS26 97 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 PYGO1Q9Y3Y4 419 aa10.75□□□□□ -0.69
CLN6-219ENST00000637329 TRAV12-1A0A0B4J245 112 aa10.74□□□□□ -0.69
CLN6-219ENST00000637329 IGIPA6NJ69 53 aa10.74□□□□□ -0.69
CLN6-219ENST00000637329 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
CLN6-219ENST00000637329 TEX43Q6ZNM6 134 aa10.74□□□□□ -0.69
CLN6-219ENST00000637329 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
CLN6-219ENST00000637329 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
CLN6-219ENST00000637329 H7C423 109 aa10.73□□□□□ -0.69
CLN6-219ENST00000637329 S100A12P80511 92 aa10.73□□□□□ -0.69
CLN6-219ENST00000637329 PAPPA-AS1Q5QFB9 102 aa10.73□□□□□ -0.69
CLN6-219ENST00000637329 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
CLN6-219ENST00000637329 TIMM21Q9BVV7 248 aa10.73□□□□□ -0.69
CLN6-219ENST00000637329 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 H0Y8G0 127 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 HTN3P15516 51 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 Q6ZTC4 211 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 BAALCQ8WXS3 180 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 ICOSQ9Y6W8 199 aa10.72□□□□□ -0.69
CLN6-219ENST00000637329 TRBV6-8A0A0A6YYG3 113 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 PRSS1P07477 247 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.69
CLN6-219ENST00000637329 ODF1Q14990 250 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 MRPL23Q16540 153 aaKnown RBP10.71□□□□□ -0.69
CLN6-219ENST00000637329 NTM-AS1Q6ZSK4 140 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
CLN6-219ENST00000637329 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 WWC2-AS2Q96NR7 200 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 UBE2D4Q9Y2X8 147 aa10.71□□□□□ -0.69
CLN6-219ENST00000637329 TENM3Q9P273 2699 aa10.7□□□□□ -0.7
CLN6-219ENST00000637329 A0A087WX48 190 aa10.7□□□□□ -0.7
CLN6-219ENST00000637329 A0A0J9YY99 117 aa10.7□□□□□ -0.7
CLN6-219ENST00000637329 CDPF1Q6NVV7 123 aa10.7□□□□□ -0.7
CLN6-219ENST00000637329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.69□□□□□ -0.7
CLN6-219ENST00000637329 IGKV2-29A2NJV5 120 aaPredicted RBP10.69□□□□□ -0.7
CLN6-219ENST00000637329 NANOS2P60321 138 aaKnown RBP10.69□□□□□ -0.7
CLN6-219ENST00000637329 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
CLN6-219ENST00000637329 PMVKQ15126 192 aa10.69□□□□□ -0.7
CLN6-219ENST00000637329 VAMP8Q9BV40 100 aa10.69□□□□□ -0.7
CLN6-219ENST00000637329 CSDC2Q9Y534 153 aaKnown RBP10.69□□□□□ -0.7
CLN6-219ENST00000637329 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
CLN6-219ENST00000637329 TRAV10A0A0B4J240 114 aa10.68□□□□□ -0.7
CLN6-219ENST00000637329 UBE2L6O14933 153 aa10.68□□□□□ -0.7
CLN6-219ENST00000637329 ZNF25P17030 456 aaPredicted RBP10.68□□□□□ -0.7
CLN6-219ENST00000637329 PLNP26678 52 aa10.68□□□□□ -0.7
CLN6-219ENST00000637329 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
CLN6-219ENST00000637329 DEFB131BA0A096LNP1 70 aa10.67□□□□□ -0.7
CLN6-219ENST00000637329 F8VRH5 84 aa10.67□□□□□ -0.7
CLN6-219ENST00000637329 TIRAPP58753 221 aa10.67□□□□□ -0.7
CLN6-219ENST00000637329 A0A096LPF7 62 aa10.66□□□□□ -0.7
CLN6-219ENST00000637329 DPM2O94777 84 aa10.66□□□□□ -0.7
CLN6-219ENST00000637329 FGF6P10767 208 aa10.66□□□□□ -0.7
CLN6-219ENST00000637329 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
CLN6-219ENST00000637329 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
CLN6-219ENST00000637329 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms