RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
CLN6-218ENST00000637223 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
CLN6-218ENST00000637223 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
CLN6-218ENST00000637223 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
CLN6-218ENST00000637223 S100A6P06703 90 aa11.69□□□□□ -0.54
CLN6-218ENST00000637223 DNAH10OSP0CZ25 163 aa11.69□□□□□ -0.54
CLN6-218ENST00000637223 COA6Q5JTJ3 125 aaKnown RBP11.69□□□□□ -0.54
CLN6-218ENST00000637223 NTM-AS1Q6ZSK4 140 aa11.69□□□□□ -0.54
CLN6-218ENST00000637223 DNAH2Q9P225 4427 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 IGHV3-30P01768 117 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 PPBPP02775 128 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 IGHV3-30-3P0DP02 117 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 IGHV3-30-5P0DP03 117 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 TMEM97Q5BJF2 176 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 Q8N3U1 123 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
CLN6-218ENST00000637223 TRBV6-5A0A0K0K1A5 114 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 CKS2P33552 79 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 Q0VG73 95 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 LINC01556Q5JQF7 62 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 NRACQ8N912 160 aa11.67□□□□□ -0.54
CLN6-218ENST00000637223 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
CLN6-218ENST00000637223 D6R8Y8 96 aa11.66□□□□□ -0.54
CLN6-218ENST00000637223 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
CLN6-218ENST00000637223 LAMTOR2Q9Y2Q5 125 aa11.66□□□□□ -0.54
CLN6-218ENST00000637223 DNAH10Q8IVF4 4471 aa11.66□□□□□ -0.54
CLN6-218ENST00000637223 TRBV25-1A0A075B6N4 114 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 IGHV1-24A0A0C4DH33 117 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 COTL1Q14019 142 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 C1orf134Q5TEV5 83 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 NIT1Q86X76 327 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 ALKBH7Q9BT30 221 aaPredicted RBP11.65□□□□□ -0.54
CLN6-218ENST00000637223 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
CLN6-218ENST00000637223 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 PPP1R17O96001 155 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 PMCHP20382 165 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 IQCJQ1A5X6 159 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
CLN6-218ENST00000637223 I3L3M4 83 aa11.63□□□□□ -0.55
CLN6-218ENST00000637223 AMTP48728 403 aa11.63□□□□□ -0.55
CLN6-218ENST00000637223 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
CLN6-218ENST00000637223 GAGE6Q13070 117 aa11.63□□□□□ -0.55
CLN6-218ENST00000637223 A0A087WX48 190 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 RTL8CO15255 209 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 POLR2KP53803 58 aaKnown RBP11.62□□□□□ -0.55
CLN6-218ENST00000637223 ORMDL3Q8N138 153 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 C10orf126Q8N4M7 172 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 HECTD4Q9Y4D8 3996 aa11.62□□□□□ -0.55
CLN6-218ENST00000637223 K7EP13 123 aa11.61□□□□□ -0.55
CLN6-218ENST00000637223 NPYP01303 97 aa11.61□□□□□ -0.55
CLN6-218ENST00000637223 NDUFA6P56556 154 aa11.61□□□□□ -0.55
CLN6-218ENST00000637223 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
CLN6-218ENST00000637223 TRBV27A0A0K0K1C4 114 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 VCYO14598 125 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 TSHBP01222 138 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 ESDP10768 282 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
CLN6-218ENST00000637223 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
CLN6-218ENST00000637223 SNRPEP62304 92 aaKnown RBP11.59□□□□□ -0.55
CLN6-218ENST00000637223 Q8N976 141 aa11.59□□□□□ -0.55
CLN6-218ENST00000637223 C18orf32Q8TCD1 76 aa11.59□□□□□ -0.55
CLN6-218ENST00000637223 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
CLN6-218ENST00000637223 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 UBE2L6O14933 153 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 PKIAP61925 76 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 BAGE3Q86Y29 109 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 Q9HAA7 133 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
CLN6-218ENST00000637223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.57□□□□□ -0.56
CLN6-218ENST00000637223 IGKV2-29A2NJV5 120 aaPredicted RBP11.57□□□□□ -0.56
CLN6-218ENST00000637223 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
CLN6-218ENST00000637223 FCER1GP30273 86 aa11.57□□□□□ -0.56
CLN6-218ENST00000637223 RBX1P62877 108 aa11.57□□□□□ -0.56
CLN6-218ENST00000637223 PACRGQ96M98 296 aaPredicted RBP11.57□□□□□ -0.56
CLN6-218ENST00000637223 SMIM2Q9BVW6 85 aa11.57□□□□□ -0.56
CLN6-218ENST00000637223 DNAH17Q9UFH2 4485 aa11.56□□□□□ -0.56
CLN6-218ENST00000637223 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
CLN6-218ENST00000637223 CHCHD1Q96BP2 118 aaKnown RBP11.56□□□□□ -0.56
CLN6-218ENST00000637223 KIR2DL4Q99706 377 aa11.56□□□□□ -0.56
CLN6-218ENST00000637223 LOC389332A0A1B0GUA5 103 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 ANGP03950 147 aaKnown RBP11.55□□□□□ -0.56
CLN6-218ENST00000637223 LAGE3Q14657 143 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 LINC00336Q6ZUF6 198 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 UBE2WQ96B02 151 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 FAT2Q9NYQ8 4349 aa11.55□□□□□ -0.56
CLN6-218ENST00000637223 LOC105371267A0A1B0GV96 52 aa11.54□□□□□ -0.56
CLN6-218ENST00000637223 PRSS29PA6NIE9 313 aa11.54□□□□□ -0.56
CLN6-218ENST00000637223 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
CLN6-218ENST00000637223 HIST3H2BBQ8N257 126 aa11.54□□□□□ -0.56
CLN6-218ENST00000637223 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
CLN6-218ENST00000637223 IGLV4-60A0A075B6I1 120 aa11.53□□□□□ -0.56
CLN6-218ENST00000637223 K7EMI3 77 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms