RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 K7EP34 96 aa13.4□□□□□ -0.26
CLN8-211ENST00000636934 AZU1P20160 251 aa13.4□□□□□ -0.26
CLN8-211ENST00000636934 SAMD5Q5TGI4 173 aa13.4□□□□□ -0.26
CLN8-211ENST00000636934 Q6ZSN1 163 aa13.4□□□□□ -0.26
CLN8-211ENST00000636934 RNASE8Q8TDE3 154 aaKnown RBP13.4□□□□□ -0.26
CLN8-211ENST00000636934 C1QTNF4Q9BXJ3 329 aa13.4□□□□□ -0.26
CLN8-211ENST00000636934 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
CLN8-211ENST00000636934 A6NJY4 79 aa13.39□□□□□ -0.27
CLN8-211ENST00000636934 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
CLN8-211ENST00000636934 COTL1Q14019 142 aa13.39□□□□□ -0.27
CLN8-211ENST00000636934 OR5A1Q8NGJ0 315 aa13.39□□□□□ -0.27
CLN8-211ENST00000636934 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
CLN8-211ENST00000636934 TRGV1A0A0A0MS02 117 aa13.38□□□□□ -0.27
CLN8-211ENST00000636934 LGALS3P17931 250 aaKnown RBP13.38□□□□□ -0.27
CLN8-211ENST00000636934 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
CLN8-211ENST00000636934 PHLDA1Q8WV24 401 aaPredicted RBP13.38□□□□□ -0.27
CLN8-211ENST00000636934 AMELXQ99217 191 aa13.38□□□□□ -0.27
CLN8-211ENST00000636934 LEPROTO15243 131 aa13.37□□□□□ -0.27
CLN8-211ENST00000636934 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
CLN8-211ENST00000636934 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
CLN8-211ENST00000636934 TMEM223A0PJW6 202 aa13.37□□□□□ -0.27
CLN8-211ENST00000636934 J3QQQ9 107 aa13.37□□□□□ -0.27
CLN8-211ENST00000636934 TRBV10-1A0A0K0K1A3 114 aa13.36□□□□□ -0.27
CLN8-211ENST00000636934 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLN8-211ENST00000636934 PLEKHB2Q96CS7 222 aa13.36□□□□□ -0.27
CLN8-211ENST00000636934 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
CLN8-211ENST00000636934 CHCHD7Q9BUK0 85 aa13.36□□□□□ -0.27
CLN8-211ENST00000636934 SPCS1Q9Y6A9 102 aa13.36□□□□□ -0.27
CLN8-211ENST00000636934 TRAV4A0A0B4J268 109 aa13.35□□□□□ -0.27
CLN8-211ENST00000636934 A0A1B0GWB2 263 aa13.35□□□□□ -0.27
CLN8-211ENST00000636934 K7ERJ3 54 aa13.35□□□□□ -0.27
CLN8-211ENST00000636934 ZNF22P17026 224 aaPredicted RBP13.35□□□□□ -0.27
CLN8-211ENST00000636934 SPANXB1Q9NS25 103 aaPredicted RBP13.35□□□□□ -0.27
CLN8-211ENST00000636934 UNC79Q9P2D8 2635 aa13.35□□□□□ -0.27
CLN8-211ENST00000636934 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
CLN8-211ENST00000636934 NAA38Q9BRA0 125 aaKnown RBP13.35□□□□□ -0.27
CLN8-211ENST00000636934 A0A0J9YXV3 536 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 GAGE12BA1L429 117 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 CIDEAO60543 219 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 LY6G6DO95868 133 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 C19orf73Q9NVV2 129 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 UBE2D4Q9Y2X8 147 aa13.34□□□□□ -0.27
CLN8-211ENST00000636934 A0A0J9YY99 117 aa13.33□□□□□ -0.28
CLN8-211ENST00000636934 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.28
CLN8-211ENST00000636934 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
CLN8-211ENST00000636934 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
CLN8-211ENST00000636934 IGLL5B9A064 214 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 PF4P02776 101 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 SMR3AQ99954 134 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 TIMM21Q9BVV7 248 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 ACANP16112 2415 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 WNK1Q9H4A3 2382 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 ITPR2Q14571 2701 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 K7EQD1 137 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 TSPEAR-AS2P59090 65 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 SMAGPQ0VAQ4 97 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 Q9UF83 564 aa13.32□□□□□ -0.28
CLN8-211ENST00000636934 GIG44P09565 113 aaPredicted RBP13.31□□□□□ -0.28
CLN8-211ENST00000636934 RPL35AP18077 110 aaKnown RBP13.31□□□□□ -0.28
CLN8-211ENST00000636934 Q6ZTI0 123 aa13.31□□□□□ -0.28
CLN8-211ENST00000636934 SLC25A29Q8N8R3 303 aa13.31□□□□□ -0.28
CLN8-211ENST00000636934 ZNF479Q96JC4 524 aa13.31□□□□□ -0.28
CLN8-211ENST00000636934 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
CLN8-211ENST00000636934 FOSL1P15407 271 aa13.3□□□□□ -0.28
CLN8-211ENST00000636934 DAZ4Q86SG3 579 aaKnown RBP13.3□□□□□ -0.28
CLN8-211ENST00000636934 DAZ3Q9NR90 486 aaKnown RBP13.3□□□□□ -0.28
CLN8-211ENST00000636934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.3□□□□□ -0.28
CLN8-211ENST00000636934 IGHV3-38A0A0C4DH36 116 aa13.3□□□□□ -0.28
CLN8-211ENST00000636934 IGKV2-29A2NJV5 120 aaPredicted RBP13.3□□□□□ -0.28
CLN8-211ENST00000636934 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
CLN8-211ENST00000636934 FAM104AQ969W3 186 aa13.3□□□□□ -0.28
CLN8-211ENST00000636934 NOP10Q9NPE3 64 aaKnown RBP13.3□□□□□ -0.28
CLN8-211ENST00000636934 NF1P21359 2839 aa13.29□□□□□ -0.28
CLN8-211ENST00000636934 DGAT2L7PQ6IED9 249 aa13.28□□□□□ -0.28
CLN8-211ENST00000636934 CEMP1Q6PRD7 247 aaPredicted RBP13.28□□□□□ -0.28
CLN8-211ENST00000636934 OVOL2Q9BRP0 275 aa13.28□□□□□ -0.28
CLN8-211ENST00000636934 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
CLN8-211ENST00000636934 LINC00482Q8N8I6 264 aa13.27□□□□□ -0.28
CLN8-211ENST00000636934 WFDC10AQ9H1F0 79 aa13.27□□□□□ -0.28
CLN8-211ENST00000636934 HECTD1Q9ULT8 2610 aa13.27□□□□□ -0.29
CLN8-211ENST00000636934 UBE2D1P51668 147 aa13.27□□□□□ -0.29
CLN8-211ENST00000636934 CSNK1G2-AS1Q8NCQ2 148 aa13.27□□□□□ -0.29
CLN8-211ENST00000636934 Q6ZUT4 128 aa13.26□□□□□ -0.29
CLN8-211ENST00000636934 MTORP42345 2549 aa13.26□□□□□ -0.29
CLN8-211ENST00000636934 TRGV2A0A075B6R0 118 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 IGHV3-30P01768 117 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 IGHV3-30-5P0DP03 117 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 INSL3P51460 131 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 KRTAP10-3P60369 221 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 UBE2D3P61077 147 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 UBE2D2P62837 147 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 GEMIN7Q9H840 131 aaKnown RBP13.25□□□□□ -0.29
CLN8-211ENST00000636934 IGHV1-58A0A0C4DH39 117 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 TMEM238C9JI98 176 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 OCIAD2Q56VL3 154 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 CBY1Q9Y3M2 126 aa13.25□□□□□ -0.29
CLN8-211ENST00000636934 PLAC8L1A1L4L8 177 aa13.24□□□□□ -0.29
CLN8-211ENST00000636934 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
CLN8-211ENST00000636934 TIRAPP58753 221 aa13.24□□□□□ -0.29
CLN8-211ENST00000636934 CSDC2Q9Y534 153 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms