RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 CRYGAP11844 174 aa4.59□□□□□ -1.68
SCN2A-213ENST00000636769 CEMP1Q6PRD7 247 aaPredicted RBP4.58□□□□□ -1.68
SCN2A-213ENST00000636769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.58□□□□□ -1.68
SCN2A-213ENST00000636769 YLPM1P49750 1951 aaKnown RBP4.58□□□□□ -1.68
SCN2A-213ENST00000636769 SEM1Q6ZVN7 128 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 LINC00467Q9BRT7 94 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 DKK4Q9UBT3 224 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 CADP27708 2225 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 URB1-AS1Q96HZ7 61 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 C6orf99Q4VX62 202 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 SHISA2Q6UWI4 295 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 IGFL2Q6UWQ7 119 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 Q8N9L7 120 aa4.58□□□□□ -1.68
SCN2A-213ENST00000636769 RPL28P46779 137 aaKnown RBP4.57□□□□□ -1.68
SCN2A-213ENST00000636769 COX17Q14061 63 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 SLPIP03973 132 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 RETNQ9HD89 108 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 CCL24O00175 119 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 B9D2Q9BPU9 175 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 PPDPFQ9H3Y8 114 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 APRG1Q8IVJ8 170 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
SCN2A-213ENST00000636769 TCF20Q9UGU0 1960 aaKnown RBP4.57□□□□□ -1.68
SCN2A-213ENST00000636769 SCXQ7RTU7 201 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 VWA8A3KMH1 1905 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 PRYO14603 147 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 Q6ZS46 218 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 NTM-AS1Q6ZSK4 140 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 CCDC140Q96MF4 163 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 SPTBN2O15020 2390 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 TSHBP01222 138 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 FER1L5A0AVI2 2057 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 EBI3Q14213 229 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 IGIPA6NJ69 53 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 MRGPRG-AS1Q2M3A8 158 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 SPRNQ5BIV9 151 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 TNRC6BQ9UPQ9 1833 aaKnown RBP4.56□□□□□ -1.68
SCN2A-213ENST00000636769 TRBV6-4A0A1B0GX49 114 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 Q6ZQY7 126 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 KIR2DL5BQ8NHK3 375 aa4.56□□□□□ -1.68
SCN2A-213ENST00000636769 ODF3BA8MYP8 253 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 Q8N7P7 452 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 SMIM11BQ8TCY0 68 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 DEFB112Q30KQ8 113 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 K7EQG2 157 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 CCL18P55774 89 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 USF3Q68DE3 2245 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 RNF223E7ERA6 249 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 K7ENP7 123 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 REG3AQ06141 175 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 IGHV4-59P01825 116 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 C9orf66Q5T8R8 295 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 COX8CQ7Z4L0 72 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 ZFAND3Q9H8U3 227 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 TANC1Q9C0D5 1861 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 SLURP1P55000 103 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 IGF1P05019 195 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 UNQ9165/PRO28630Q6UXU0 137 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 SIRPDQ9H106 197 aa4.55□□□□□ -1.68
SCN2A-213ENST00000636769 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
SCN2A-213ENST00000636769 OBSL1O75147 1896 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 KLK12Q9UKR0 248 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 ZNF407Q9C0G0 2248 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 ESRGQ1W209 222 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 C4orf3Q8WVX3 66 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 UBE2D4Q9Y2X8 147 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 KLK5Q9Y337 293 aaPredicted RBP4.54□□□□□ -1.68
SCN2A-213ENST00000636769 C9orf85Q96MD7 179 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 M0R378 163 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 C14orf177Q52M58 125 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 WFDC10AQ9H1F0 79 aa4.54□□□□□ -1.68
SCN2A-213ENST00000636769 CNOT1A5YKK6 2376 aaKnown RBP4.54□□□□□ -1.68
SCN2A-213ENST00000636769 TRBV7-6A0A0J9YX20 115 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 TMEM254Q8TBM7 123 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 MAP6D1Q9H9H5 199 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 KLLNB2CW77 178 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 THADAQ6YHU6 1953 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 RNASE3P12724 160 aaKnown RBP4.53□□□□□ -1.68
SCN2A-213ENST00000636769 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
SCN2A-213ENST00000636769 LIMD2Q9BT23 127 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 A0A087WVE0 104 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 CRIP2P52943 208 aaPredicted RBP4.52□□□□□ -1.69
SCN2A-213ENST00000636769 Q8IZM0 81 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 C1orf158Q8N1D5 194 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 POM121L12Q8N7R1 296 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 VPREB1P12018 145 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 PSMG3-AS1Q96PY0 264 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 SMAD5-AS1Q9Y6J3 95 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 COL4A6Q14031 1691 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 A6NDX4 124 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 LINC00269Q8N2A0 174 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 Q8N3U1 123 aa4.52□□□□□ -1.69
SCN2A-213ENST00000636769 IGF2-ASQ6U949 168 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms