RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 DYNC2LI1Q8TCX1 351 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 PFDN5Q99471 154 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 GABARAPL3Q9BY60 117 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 LYRM2Q9NU23 88 aaPredicted RBP0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 CCDC59Q9P031 241 aaKnown RBP0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 C11orf21Q9P2W6 132 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 EXTL2Q9UBQ6 330 aa0.76□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMSB15BA0A087X1C1 80 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 TRAV13-1A0A0B4J241 112 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP4-8A0A0G2JLE6 195 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 LOC107984156A0A0G2JMH3 177 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 LOC100996750A0A140TA64 210 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 SMIM30A4D0T7 59 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 IFITM5A6NNB3 132 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMEM238C9JI98 176 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 F8WDY8 70 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 MED6O75586 246 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 APCSP02743 223 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 UCHL1P09936 223 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 OR5AL1P0C617 328 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 FCGR1AP12314 374 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 HRES1P13985 223 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 HOXB6P17509 224 aaKnown RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 FGF7P21781 194 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 MYL9P24844 172 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 RPL12P30050 165 aaKnown RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 RND3P61587 244 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 NCS1P62166 190 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 SMCO1Q147U7 214 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 CTF1Q16619 201 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 AARDQ4LEZ3 155 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 SMUG1Q53HV7 270 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 FAM74A1Q5RGS3 127 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 PCP2Q8IVA1 136 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 ARL17AQ8IVW1 177 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 SELENOHQ8IZQ5 122 aaKnown RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 ZNF486Q96H40 463 aaPredicted RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMEM80Q96HE8 168 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 CIB3Q96Q77 187 aaPredicted RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 ALKBH7Q9BT30 221 aaPredicted RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP9-9Q9BYP9 154 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 MED28Q9H204 178 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMEM14CQ9P0S9 112 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 STRAPQ9Y3F4 350 aaKnown RBP0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 ARL2-SNX15V9GYD0 113 aa0.75□□□□□ -2.29
SYNGAP1-215ENST00000636443 IGLV5-37A0A075B6J1 123 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 TRBV30A0A0K0K1B3 111 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 EFCAB10A6NFE3 127 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 NOTOA8MTQ0 251 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 ZNF727A8MUV8 499 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 C1orf196B1AJZ1 125 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 H7C2G1 150 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 K7EQM0 130 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 OR7C2O60412 319 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 B3GALNT1O75752 331 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 NBEAP1P0C6P0 100 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 ZNF25P17030 456 aaPredicted RBP0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 RAB3BP20337 219 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 CAMLGP49069 296 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMBIM6P55061 237 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 UCP3P55916 312 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 GNG5P63218 68 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 UBE2L3P68036 154 aaKnown RBP0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 SCGB2B2Q4G0G5 96 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 C10orf91Q5T1B1 145 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 SPANXN1Q5VSR9 72 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 MIC13Q5XKP0 118 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP5-4Q6L8H1 288 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 Q75L30 129 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 GPX8Q8TED1 209 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMED6Q8WW62 240 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 OBSCN-AS1Q96MR7 158 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 ZNF471Q9BX82 626 aaPredicted RBP0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP4-2Q9BYR5 136 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 TMEM126AQ9H061 195 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 GABARAPL1Q9H0R8 117 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 C11orf1Q9H5F2 150 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 CYTL1Q9NRR1 136 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 PRO2289Q9P1D8 64 aa0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 C14orf166Q9Y224 244 aaKnown RBP0.74□□□□□ -2.29
SYNGAP1-215ENST00000636443 IGKV3D-20A0A0C4DH25 116 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 MUC21A0A140T8X8 626 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 AQP12BA6NM10 295 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 H7C423 109 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 SYNGR2O43760 224 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 KRTAP5-8O75690 187 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 SCO1O75880 301 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 ERC2-IT1O76042 136 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 PRSS2P07478 247 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 METTL15P1P0C7V9 234 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 CALB2P22676 271 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 CKS1BP61024 79 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 BAXQ07812 192 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 RNASE13Q5GAN3 156 aaKnown RBP0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 C2orf82Q6UX34 121 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 NRARPQ7Z6K4 114 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 AQP12AQ8IXF9 295 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 OR5C1Q8NGR4 320 aa0.73□□□□□ -2.29
SYNGAP1-215ENST00000636443 AP1S3Q96PC3 154 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms