RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
CACNA1A-220ENST00000635988 TMEM89A2RUT3 159 aa10.83□□□□□ -0.68
CACNA1A-220ENST00000635988 UBE2D4Q9Y2X8 147 aa10.83□□□□□ -0.68
CACNA1A-220ENST00000635988 CEMP1Q6PRD7 247 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-220ENST00000635988 SPTBN1Q01082 2364 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 NDUFA1O15239 70 aa10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 NPC2P61916 151 aa10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 IMUPQ9GZP8 106 aa10.82□□□□□ -0.68
CACNA1A-220ENST00000635988 IGHV4-61A0A0C4DH41 118 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 TIRAPP58753 221 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 COPS9Q8WXC6 57 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 TMEM101Q96IK0 257 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 SPTA1P02549 2419 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-220ENST00000635988 Q6ZSV7 163 aa10.8□□□□□ -0.68
CACNA1A-220ENST00000635988 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
CACNA1A-220ENST00000635988 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-220ENST00000635988 IGLV5-45A0A087WSX0 123 aa10.79□□□□□ -0.68
CACNA1A-220ENST00000635988 A8MZ25 164 aa10.79□□□□□ -0.68
CACNA1A-220ENST00000635988 PROK1P58294 105 aa10.79□□□□□ -0.68
CACNA1A-220ENST00000635988 ZFHX2Q9C0A1 2572 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-220ENST00000635988 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
CACNA1A-220ENST00000635988 COX7A2LO14548 114 aa10.78□□□□□ -0.68
CACNA1A-220ENST00000635988 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
CACNA1A-220ENST00000635988 C10orf105Q8TEF2 133 aa10.78□□□□□ -0.68
CACNA1A-220ENST00000635988 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
CACNA1A-220ENST00000635988 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 PRORYQ9H606 182 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 RBMY1A1P0DJD3 496 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 RBMY1CP0DJD4 496 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 HTN1P15515 57 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
CACNA1A-220ENST00000635988 LINC00308Q8TCZ7 52 aa10.76□□□□□ -0.69
CACNA1A-220ENST00000635988 MSMBP08118 114 aa10.76□□□□□ -0.69
CACNA1A-220ENST00000635988 HERVK_113P63121 156 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 DGAT2L7PQ6IED9 249 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 KNCNA6PVL3 124 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 A8MTW9 85 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 DAND5Q8N907 189 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 CHCHD5Q9BSY4 110 aa10.75□□□□□ -0.69
CACNA1A-220ENST00000635988 COL6A6A6NMZ7 2263 aa10.74□□□□□ -0.69
CACNA1A-220ENST00000635988 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
CACNA1A-220ENST00000635988 TRACP01848 142 aa10.74□□□□□ -0.69
CACNA1A-220ENST00000635988 Q6ZSN1 163 aa10.74□□□□□ -0.69
CACNA1A-220ENST00000635988 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
CACNA1A-220ENST00000635988 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
CACNA1A-220ENST00000635988 Q9H8V8 135 aa10.73□□□□□ -0.69
CACNA1A-220ENST00000635988 PPDPFQ9H3Y8 114 aa10.72□□□□□ -0.69
CACNA1A-220ENST00000635988 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
CACNA1A-220ENST00000635988 DUX5Q96PT3 197 aa10.72□□□□□ -0.69
CACNA1A-220ENST00000635988 Q9UF83 564 aa10.72□□□□□ -0.69
CACNA1A-220ENST00000635988 NBASA2RRP1 2371 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 C19orf84I3L1E1 186 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 ATP5G1P05496 136 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 DEFB131AP59861 70 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 FAM19A3Q7Z5A8 133 aa10.71□□□□□ -0.69
CACNA1A-220ENST00000635988 FAM236AA0A1B0GUQ0 79 aa10.71□□□□□ -0.7
CACNA1A-220ENST00000635988 FAM236BA0A1B0GV22 79 aa10.71□□□□□ -0.7
CACNA1A-220ENST00000635988 BEAN1Q3B7T3 259 aa10.71□□□□□ -0.7
CACNA1A-220ENST00000635988 CCL19Q99731 98 aa10.71□□□□□ -0.7
CACNA1A-220ENST00000635988 SVEP1Q4LDE5 3571 aa10.7□□□□□ -0.7
CACNA1A-220ENST00000635988 DOPEY2Q9Y3R5 2298 aa10.7□□□□□ -0.7
CACNA1A-220ENST00000635988 LY6DQ14210 128 aa10.7□□□□□ -0.7
CACNA1A-220ENST00000635988 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 B4DSR2 109 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 IGHV3OR16-12A0A075B7B8 117 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 RS1O15537 224 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 IGHV4-59P01825 116 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 LINC00242Q5T6M2 205 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 FAM222AQ5U5X8 452 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 LINC01587Q99440 93 aa10.69□□□□□ -0.7
CACNA1A-220ENST00000635988 IGHV4-30-2A0A087WSY4 118 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 COX6A2Q02221 97 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 DAZ2Q13117 558 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 SDIM1Q6ZPB5 146 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 DAZ4Q86SG3 579 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 DAZ3Q9NR90 486 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 PEMTQ9UBM1 199 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 RELNP78509 3460 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 INAFM2P0DMQ5 153 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 ATP5J2P56134 94 aa10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 SPTAN1Q13813 2472 aaKnown RBP10.68□□□□□ -0.7
CACNA1A-220ENST00000635988 AVPP01185 164 aa10.67□□□□□ -0.7
CACNA1A-220ENST00000635988 CXCL5P42830 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms