RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 CKS2P33552 79 aa10.43□□□□□ -0.74
CLN6-211ENST00000635754 AMTP48728 403 aa10.43□□□□□ -0.74
CLN6-211ENST00000635754 ELOBQ15370 118 aa10.43□□□□□ -0.74
CLN6-211ENST00000635754 DEFB104AQ8WTQ1 72 aa10.43□□□□□ -0.74
CLN6-211ENST00000635754 TMEM70Q9BUB7 260 aa10.43□□□□□ -0.74
CLN6-211ENST00000635754 TRAV9-1A0A075B6T8 112 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 I3L3M4 83 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 PMCHP20382 165 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 GAGE6Q13070 117 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
CLN6-211ENST00000635754 Q9HAA7 133 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 RPS10P5Q9NQ39 176 aa10.42□□□□□ -0.74
CLN6-211ENST00000635754 UBE2L6O14933 153 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 APCSP02743 223 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 TNP2Q05952 138 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 NRACQ8N912 160 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 D6R8Y8 96 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 SNAPINO95295 136 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 PPBPP02775 128 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
CLN6-211ENST00000635754 SUMO2P61956 95 aaKnown RBP10.41□□□□□ -0.74
CLN6-211ENST00000635754 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 SVBPQ8N300 66 aa10.41□□□□□ -0.74
CLN6-211ENST00000635754 DNAH2Q9P225 4427 aa10.4□□□□□ -0.74
CLN6-211ENST00000635754 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.75
CLN6-211ENST00000635754 ANGP03950 147 aaKnown RBP10.4□□□□□ -0.75
CLN6-211ENST00000635754 Q8N976 141 aa10.4□□□□□ -0.75
CLN6-211ENST00000635754 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.75
CLN6-211ENST00000635754 DNAH10Q8IVF4 4471 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 A0A1B0GVY2 172 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 VCYO14598 125 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 PSCAO43653 123 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 TNFRSF6BO95407 300 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 RBX1P62877 108 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 ORMDL3Q8N138 153 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
CLN6-211ENST00000635754 TSHBP01222 138 aa10.38□□□□□ -0.75
CLN6-211ENST00000635754 CRPP02741 224 aa10.38□□□□□ -0.75
CLN6-211ENST00000635754 TMEM136Q6ZRR5 245 aa10.38□□□□□ -0.75
CLN6-211ENST00000635754 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
CLN6-211ENST00000635754 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
CLN6-211ENST00000635754 PHOX2AO14813 284 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 NPYP01303 97 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 FCER1GP30273 86 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 Q0VG73 95 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 RMI2Q96E14 147 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
CLN6-211ENST00000635754 A0A1B0GUV1 79 aa10.36□□□□□ -0.75
CLN6-211ENST00000635754 H7C423 109 aa10.36□□□□□ -0.75
CLN6-211ENST00000635754 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
CLN6-211ENST00000635754 SLC7A5P1Q8MH63 180 aa10.36□□□□□ -0.75
CLN6-211ENST00000635754 PRELID3AQ96N28 172 aa10.36□□□□□ -0.75
CLN6-211ENST00000635754 COX11Q9Y6N1 276 aa10.36□□□□□ -0.75
CLN6-211ENST00000635754 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.35□□□□□ -0.75
CLN6-211ENST00000635754 IGKV2-29A2NJV5 120 aaPredicted RBP10.35□□□□□ -0.75
CLN6-211ENST00000635754 AMMECR1LQ6DCA0 310 aa10.35□□□□□ -0.75
CLN6-211ENST00000635754 LAMTOR2Q9Y2Q5 125 aa10.35□□□□□ -0.75
CLN6-211ENST00000635754 EREGO14944 169 aa10.34□□□□□ -0.75
CLN6-211ENST00000635754 TCAPO15273 167 aa10.34□□□□□ -0.75
CLN6-211ENST00000635754 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
CLN6-211ENST00000635754 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
CLN6-211ENST00000635754 COX19Q49B96 90 aa10.34□□□□□ -0.75
CLN6-211ENST00000635754 SMIM2Q9BVW6 85 aa10.34□□□□□ -0.75
CLN6-211ENST00000635754 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 ESDP10768 282 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 MIAQ16674 131 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
CLN6-211ENST00000635754 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 ENHOQ6UWT2 76 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 LINC00269Q8N2A0 174 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 C20orf203Q8NBC4 194 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 PRR34Q9NV39 138 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 A0A087WTM6 91 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 FGF6P10767 208 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 ZNF25P17030 456 aaPredicted RBP10.33□□□□□ -0.76
CLN6-211ENST00000635754 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 GNB1LQ9BYB4 327 aa10.33□□□□□ -0.76
CLN6-211ENST00000635754 REG3AQ06141 175 aa10.32□□□□□ -0.76
CLN6-211ENST00000635754 MAP1LC3AQ9H492 121 aa10.32□□□□□ -0.76
CLN6-211ENST00000635754 FAT2Q9NYQ8 4349 aa10.32□□□□□ -0.76
CLN6-211ENST00000635754 DNAH17Q9UFH2 4485 aa10.31□□□□□ -0.76
CLN6-211ENST00000635754 MT-ND6P03923 174 aa10.31□□□□□ -0.76
CLN6-211ENST00000635754 TMEM101Q96IK0 257 aa10.31□□□□□ -0.76
CLN6-211ENST00000635754 HECTD4Q9Y4D8 3996 aa10.3□□□□□ -0.76
CLN6-211ENST00000635754 SMAGPQ0VAQ4 97 aa10.3□□□□□ -0.76
CLN6-211ENST00000635754 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
CLN6-211ENST00000635754 EPPK1P58107 5090 aaKnown RBP10.3□□□□□ -0.76
CLN6-211ENST00000635754 TGIF2-C20orf24A0A0A6YYL0 155 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 PRSS47A8MTI9 375 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 RAB5AP20339 215 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 KIAA1644Q3SXP7 199 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 SPATA12Q7Z6I5 190 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 TMEM18Q96B42 140 aa10.29□□□□□ -0.76
CLN6-211ENST00000635754 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
CLN6-211ENST00000635754 LOC389332A0A1B0GUA5 103 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms