RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 TMEM243Q9BU79 118 aa12.01□□□□□ -0.49
CLN6-210ENST00000635747 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
CLN6-210ENST00000635747 FOXA3P55318 350 aaPredicted RBP12□□□□□ -0.49
CLN6-210ENST00000635747 COTL1Q14019 142 aa12□□□□□ -0.49
CLN6-210ENST00000635747 Q5VSD8 79 aa12□□□□□ -0.49
CLN6-210ENST00000635747 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
CLN6-210ENST00000635747 BORCS7Q96B45 105 aa12□□□□□ -0.49
CLN6-210ENST00000635747 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
CLN6-210ENST00000635747 TMEM218A2RU14 115 aa11.99□□□□□ -0.49
CLN6-210ENST00000635747 UBE2L6O14933 153 aa11.98□□□□□ -0.49
CLN6-210ENST00000635747 SMR3BP02814 79 aaPredicted RBP11.98□□□□□ -0.49
CLN6-210ENST00000635747 Q6ZSA8 131 aa11.98□□□□□ -0.49
CLN6-210ENST00000635747 GATD1Q8NB37 220 aa11.98□□□□□ -0.49
CLN6-210ENST00000635747 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
CLN6-210ENST00000635747 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
CLN6-210ENST00000635747 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
CLN6-210ENST00000635747 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
CLN6-210ENST00000635747 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
CLN6-210ENST00000635747 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 TRAV8-4A0A0B4J246 113 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 HLA-DQA1P01909 254 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 AMTP48728 403 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.49
CLN6-210ENST00000635747 REG3AQ06141 175 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 TSKUQ8WUA8 353 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 OSTCQ9NRP0 149 aa11.96□□□□□ -0.49
CLN6-210ENST00000635747 TRAV26-2A0A0B4J265 109 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 NCR2O95944 276 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 NDUFA5Q16718 116 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 ISOC2Q96AB3 205 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
CLN6-210ENST00000635747 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
CLN6-210ENST00000635747 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
CLN6-210ENST00000635747 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
CLN6-210ENST00000635747 HAMPP81172 84 aa11.94□□□□□ -0.5
CLN6-210ENST00000635747 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
CLN6-210ENST00000635747 HIGD1CA8MV81 97 aa11.93□□□□□ -0.5
CLN6-210ENST00000635747 F8W036 122 aa11.93□□□□□ -0.5
CLN6-210ENST00000635747 ADIRFQ15847 76 aa11.93□□□□□ -0.5
CLN6-210ENST00000635747 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
CLN6-210ENST00000635747 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
CLN6-210ENST00000635747 C10orf91Q5T1B1 145 aa11.92□□□□□ -0.5
CLN6-210ENST00000635747 CLRN3Q8NCR9 226 aa11.92□□□□□ -0.5
CLN6-210ENST00000635747 H7C423 109 aa11.91□□□□□ -0.5
CLN6-210ENST00000635747 ADCYAP1P18509 176 aa11.91□□□□□ -0.5
CLN6-210ENST00000635747 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
CLN6-210ENST00000635747 KRTAP26-1Q6PEX3 210 aa11.91□□□□□ -0.5
CLN6-210ENST00000635747 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
CLN6-210ENST00000635747 TMEM191AQ9H0A3 160 aa11.91□□□□□ -0.5
CLN6-210ENST00000635747 CARHSP1Q9Y2V2 147 aaKnown RBP11.91□□□□□ -0.5
CLN6-210ENST00000635747 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
CLN6-210ENST00000635747 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
CLN6-210ENST00000635747 APCSP02743 223 aa11.9□□□□□ -0.5
CLN6-210ENST00000635747 DEFB104AQ8WTQ1 72 aa11.9□□□□□ -0.5
CLN6-210ENST00000635747 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 I3L3M4 83 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
CLN6-210ENST00000635747 PRSS1P07477 247 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 PMCHP20382 165 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 RIGQ13278 110 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 AMMECR1LQ6DCA0 310 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 CHAC1Q9BUX1 264 aa11.89□□□□□ -0.51
CLN6-210ENST00000635747 PPP1R2P9O14990 202 aa11.88□□□□□ -0.51
CLN6-210ENST00000635747 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
CLN6-210ENST00000635747 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
CLN6-210ENST00000635747 V9GYV3 84 aa11.88□□□□□ -0.51
CLN6-210ENST00000635747 NAT8BQ9UHF3 227 aa11.87□□□□□ -0.51
CLN6-210ENST00000635747 MT-ND4LP03901 98 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
CLN6-210ENST00000635747 RAB4AP20338 218 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 SCXQ7RTU7 201 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 C9orf163Q8N9P6 203 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 ANAPC16Q96DE5 110 aa11.86□□□□□ -0.51
CLN6-210ENST00000635747 PPP1R17O96001 155 aa11.85□□□□□ -0.51
CLN6-210ENST00000635747 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
CLN6-210ENST00000635747 LINC00528Q8N1L1 170 aa11.85□□□□□ -0.51
CLN6-210ENST00000635747 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
CLN6-210ENST00000635747 RNF185Q96GF1 192 aa11.84□□□□□ -0.51
CLN6-210ENST00000635747 BTF3L4Q96K17 158 aa11.84□□□□□ -0.51
CLN6-210ENST00000635747 AP5S1Q9NUS5 200 aa11.84□□□□□ -0.51
CLN6-210ENST00000635747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.83□□□□□ -0.52
CLN6-210ENST00000635747 IGKV2-29A2NJV5 120 aaPredicted RBP11.83□□□□□ -0.52
CLN6-210ENST00000635747 FGF6P10767 208 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 AMN1Q8IY45 258 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 TMEM101Q96IK0 257 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
CLN6-210ENST00000635747 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
CLN6-210ENST00000635747 TRBV27A0A0K0K1C4 114 aa11.82□□□□□ -0.52
CLN6-210ENST00000635747 SMIM27A0A1W2PRY6 76 aa11.82□□□□□ -0.52
CLN6-210ENST00000635747 hDV102S1A0JD36 115 aa11.82□□□□□ -0.52
CLN6-210ENST00000635747 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
CLN6-210ENST00000635747 CNBPP62633 177 aaKnown RBP11.82□□□□□ -0.52
CLN6-210ENST00000635747 SVBPQ8N300 66 aa11.82□□□□□ -0.52
CLN6-210ENST00000635747 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
CLN6-210ENST00000635747 A0A1B0GW15 77 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms