RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR4E1P0C645 316 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 PRB4P10163 310 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 AKR1C4P17516 323 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 ORM2P19652 201 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TAS2R30P59541 319 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC38A11Q08AI6 406 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 PDE6HQ13956 83 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TDRG1Q3Y452 100 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SCGB2B2Q4G0G5 96 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 Q6AWC8 147 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC25A34Q6PIV7 304 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 LYPD5Q6UWN5 251 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 FA2HQ7L5A8 372 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SCXQ7RTU7 201 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TMED4Q7Z7H5 227 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 BOD1L2Q8IYS8 172 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 RNASE11Q8TAA1 199 aaKnown RBP1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 AP3S1Q92572 193 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 MRAP2Q96G30 205 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM167A-AS1Q96KT0 104 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 CIB3Q96Q77 187 aaPredicted RBP1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 LINC01587Q99440 93 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM208Q9BTX3 173 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM147Q9BVK8 224 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 GGACTQ9BVM4 153 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC25A31Q9H0C2 315 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 Q9H521 79 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM14CQ9P0S9 112 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 PRO0255Q9UI72 69 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 FUT9Q9Y231 359 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 HIGD1AQ9Y241 93 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 PXMP4Q9Y6I8 212 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 ICOSQ9Y6W8 199 aa1.39□□□□□ -2.19
SMARCB1-208ENST00000634926 TRGV1A0A0A0MS02 117 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 TRAV12-3A0A0B4J271 114 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 PIGBOS1A0A0B4J2F0 54 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 IBA57-AS1B1ANH7 110 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM25AB3EWG3 89 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM25CB3EWG5 89 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM25GB3EWG6 89 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 M0R3E3 92 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 NDUFB6O95139 128 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SFT2D2O95562 160 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 CXorf1O96002 111 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 CRYGDP07320 174 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 OR5G3P0C626 314 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SCGB1C2P0DMR2 95 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 UBE2G2P60604 165 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 POLR2GP62487 172 aaKnown RBP eCLIP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 AKR1C1Q04828 323 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 IL15RAQ13261 267 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 CIRBPQ14011 172 aaKnown RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 COTL1Q14019 142 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF846Q147U1 533 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 GUK1Q16774 197 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SPANXN5Q5MJ07 72 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 LINC00305Q7Z4B0 112 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 BPIFA4PQ86YQ2 179 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 CLVS1Q8IUQ0 354 aaPredicted RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 C10orf126Q8N4M7 172 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 EIF4E3Q8N5X7 224 aaKnown RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SCGB1C1Q8TD33 95 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 DEFB104AQ8WTQ1 72 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 PPP1R14BQ96C90 147 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 FAM210AQ96ND0 272 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SLC25A21Q9BQT8 299 aaPredicted RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 ANAPC13Q9BS18 74 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 MRPL32Q9BYC8 188 aaKnown RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 ARL6Q9H0F7 186 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 AGPAT4-IT1Q9H0P7 198 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 SCP2D1Q9UJQ7 156 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 ZNF706Q9Y5V0 76 aaPredicted RBP1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 LY96Q9Y6Y9 160 aa1.38□□□□□ -2.19
SMARCB1-208ENST00000634926 TRGV2A0A075B6R0 118 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 IGKV2-40A0A087WW87 121 aaPredicted RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TRAV5A0A0B4J249 113 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TRAV4A0A0B4J268 109 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 IGSF23A1L1A6 192 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 C9orf170A2RU37 121 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 RBAKDNA6NC62 111 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 FABP12A6NFH5 140 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TMEM250H0YL14 139 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 RGS5O15539 181 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 SSSCA1O60232 199 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 IGKV2D-40P01614 121 aaPredicted RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 ORM1P02763 201 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 IGLV7-43P04211 117 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 IL5P05113 134 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 SFTA3P0C7M3 94 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 METTL15P1P0C7V9 234 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 PYYP10082 97 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 HIST1H1EP10412 219 aaKnown RBP1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 S100A7P31151 101 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 TMBIM6P55061 237 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 RHOBP62745 196 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 DPPA3Q6W0C5 159 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 OR10P1Q8NGE3 313 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 Q8TAT8 98 aa1.37□□□□□ -2.19
SMARCB1-208ENST00000634926 RAB2BQ8WUD1 216 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms