RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 C2CD3Q4AC94 2353 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 ABCA13Q86UQ4 5058 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 CHD8Q9HCK8 2581 aa-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 PPRC1Q5VV67 1664 aaKnown RBP-0.62□□□□□ -2.51
SCARNA4-201ENST00000629045 NBPF19A0A087WUL8 3843 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 FAM92AA1XBS5 289 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 CLPSL1A2RUU4 121 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 DBIP07108 87 aaKnown RBP-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 UBE2D1P51668 147 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 CCDC153Q494R4 210 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 Q5VV11 94 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 MIC13Q5XKP0 118 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 MMGT1Q8N4V1 131 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 SPRR2FQ96RM1 72 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 NPVFQ9HCQ7 196 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 SAR1AQ9NR31 198 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 SPANXA1Q9NS26 97 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 SPCS1Q9Y6A9 102 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 DNAH3Q8TD57 4116 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 PBRM1Q86U86 1689 aa-0.63□□□□□ -2.51
SCARNA4-201ENST00000629045 SPG11Q96JI7 2443 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 CSMD3Q7Z407 3707 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 NPFFO15130 113 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 SPINK4O60575 86 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 IFNA17P01571 189 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 NBEAP1P0C6P0 100 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 UBE2G1P62253 170 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 DEFB135Q30KP9 77 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 BAGE3Q86Y29 109 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 SCN3BQ9NY72 215 aa-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 PLECQ15149 4684 aaKnown RBP-0.64□□□□□ -2.51
SCARNA4-201ENST00000629045 S100A5P33763 92 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 DCDP81605 110 aaKnown RBP-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 DEFB112Q30KQ8 113 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 CFAP126Q5VTH2 177 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 SELENOSQ9BQE4 189 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 MYH9P35579 1960 aaKnown RBP-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 PLXNA2O75051 1894 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 KIAA0100Q14667 2235 aaKnown RBP-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 DNAH2Q9P225 4427 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 FAT3Q8TDW7 4589 aa-0.65□□□□□ -2.51
SCARNA4-201ENST00000629045 CELSR3Q9NYQ7 3312 aa-0.66□□□□□ -2.51
SCARNA4-201ENST00000629045 TACC2O95359 2948 aa-0.66□□□□□ -2.51
SCARNA4-201ENST00000629045 GNG14A0A1W2PPG7 69 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 H0YGG7 62 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 M0R129 80 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 BCE1O60756 84 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 MORN2Q502X0 79 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 ACACAQ13085 2346 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 KIF13AQ9H1H9 1805 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 SYNJ1O43426 1573 aa-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 RIF1Q5UIP0 2472 aaKnown RBP-0.66□□□□□ -2.52
SCARNA4-201ENST00000629045 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 MYO7BQ6PIF6 2116 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 FAM236AA0A1B0GUQ0 79 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 FAM236BA0A1B0GV22 79 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 IGLC6P0CF74 106 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 S100A3P33764 101 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 ZNF818PQ6ZRF7 136 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 CTAGE3PQ8IX95 158 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 SPTSSBQ8NFR3 76 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 ZNF609O15014 1411 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 AKAP13Q12802 2813 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 NRXN2Q9P2S2 1712 aa-0.67□□□□□ -2.52
SCARNA4-201ENST00000629045 ARHGEF10O15013 1369 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 H0YJX3 145 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 K7EP34 96 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 PSMG3Q9BT73 122 aaPredicted RBP-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 AGPAT4-IT1Q9H0P7 198 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 LINC00312Q9Y6C7 94 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 NBASA2RRP1 2371 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 LAMA3Q16787 3333 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 PRRC2CQ9Y520 2896 aaKnown RBP-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 PHIPQ8WWQ0 1821 aa-0.68□□□□□ -2.52
SCARNA4-201ENST00000629045 BICRAQ9NZM4 1560 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 C10orf71Q711Q0 1435 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 H3BNG1 76 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 PITX3O75364 302 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 IL5P05113 134 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 NEFHP12036 1026 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 PIPP12273 146 aaPredicted RBP-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 CBLN1P23435 193 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 HAMPP81172 84 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 VPS13DQ5THJ4 4388 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 PLCE1Q9P212 2302 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 PKD1P98161 4303 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 PLXNA1Q9UIW2 1896 aa-0.69□□□□□ -2.52
SCARNA4-201ENST00000629045 CCDC168Q8NDH2 2452 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 WDR87Q6ZQQ6 2873 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 LRRK2Q5S007 2527 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 NCR2O95944 276 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 MT1AP04731 61 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 COX6B1P14854 86 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 HIST1H1AQ02539 215 aaPredicted RBP-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 ALX1Q15699 326 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 Q6ZUT4 128 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 TP53AIP1Q9HCN2 124 aa-0.7□□□□□ -2.52
SCARNA4-201ENST00000629045 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms