RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
LINC00649-220ENST00000628906 RSL24D1Q9UHA3 163 aaKnown RBP3.04□□□□□ -1.92
LINC00649-220ENST00000628906 TPRKBQ9Y3C4 175 aa3.04□□□□□ -1.92
LINC00649-220ENST00000628906 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
LINC00649-220ENST00000628906 G3V3Q6 166 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 H3BMQ9 156 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 TSC22D2O75157 780 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 RAB3DO95716 219 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 ANXA3P12429 323 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
LINC00649-220ENST00000628906 SUMO2P61956 95 aaKnown RBP3.03□□□□□ -1.92
LINC00649-220ENST00000628906 CTF1Q16619 201 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 TMEM241Q24JQ0 296 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 IAH1Q2TAA2 248 aaPredicted RBP3.03□□□□□ -1.92
LINC00649-220ENST00000628906 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
LINC00649-220ENST00000628906 GCSAMLQ5JQS6 135 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 C9orf129Q5T035 196 aaKnown RBP3.03□□□□□ -1.92
LINC00649-220ENST00000628906 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 TMEM229BQ8NBD8 167 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 Q8NBF4 154 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 CMTM2Q8TAZ6 248 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 SGK494Q96LW2 274 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 MTFP1Q9UDX5 166 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 WDR83OSQ9Y284 106 aa3.03□□□□□ -1.92
LINC00649-220ENST00000628906 SMIM31A0A1B0GVY4 71 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 FABP5P3A8MUU1 101 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 B4DEV8 164 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 F8WDY8 70 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 M0R036 132 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 TPT1P13693 172 aaKnown RBP3.02□□□□□ -1.93
LINC00649-220ENST00000628906 CTRLP40313 264 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 ZNF471Q9BX82 626 aaPredicted RBP3.02□□□□□ -1.93
LINC00649-220ENST00000628906 OTORQ9NRC9 128 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 UQCC1Q9NVA1 299 aa3.02□□□□□ -1.93
LINC00649-220ENST00000628906 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 C20orf202A1L168 122 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 KRBOX1C9JBD0 128 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 M0QY20 66 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 TAS2R30P59541 319 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 RPS20P60866 119 aaKnown RBP3.01□□□□□ -1.93
LINC00649-220ENST00000628906 SPANXN2Q5MJ10 180 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 FAM74A1Q5RGS3 127 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 C10orf25Q5T742 122 aa3.01□□□□□ -1.93
LINC00649-220ENST00000628906 SLC25A21Q9BQT8 299 aaPredicted RBP3.01□□□□□ -1.93
LINC00649-220ENST00000628906 GRIFINA4D1Z8 144 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 A6NN06 94 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 H7C423 109 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 COX7A2LO14548 114 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 SSSCA1O60232 199 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 CIB2O75838 187 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 TMBIM6P55061 237 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
LINC00649-220ENST00000628906 AMMECR1LQ6DCA0 310 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 FAAP20Q6NZ36 180 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 MZT2AQ6P582 158 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 PACRGLQ8N7B6 248 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 C6orf48Q9UBA6 75 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
LINC00649-220ENST00000628906 SERTM2A0A1B0GWG4 89 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 DISC1C4P0D8 188 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 OR7C2O60412 319 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 APOA1P02647 267 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 NTF3P20783 257 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 UBE2AP49459 152 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 GNG5P63218 68 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 SPAG11BQ08648 103 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 SAPCD1Q5SSQ6 148 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 RNASEKQ6P5S7 137 aaKnown RBP2.99□□□□□ -1.93
LINC00649-220ENST00000628906 UNQ6190/PRO20217Q6UXQ8 127 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 PACRGQ96M98 296 aaPredicted RBP2.99□□□□□ -1.93
LINC00649-220ENST00000628906 SCGB3A2Q96PL1 93 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 S100A14Q9HCY8 104 aa2.99□□□□□ -1.93
LINC00649-220ENST00000628906 NDUFA1O15239 70 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 TCRAP04437 139 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 ZNF25P17030 456 aaPredicted RBP2.98□□□□□ -1.93
LINC00649-220ENST00000628906 SPRR2DP22532 72 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 GNGT1P63211 74 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 UBE2L3P68036 154 aaKnown RBP2.98□□□□□ -1.93
LINC00649-220ENST00000628906 FLI1Q01543 452 aaPredicted RBP2.98□□□□□ -1.93
LINC00649-220ENST00000628906 COTL1Q14019 142 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 LYZL1Q6UWQ5 148 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 MRPL55Q7Z7F7 128 aaKnown RBP2.98□□□□□ -1.93
LINC00649-220ENST00000628906 TMEM252Q8N6L7 170 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 AP3S1Q92572 193 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 PRRT1Q99946 306 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 CYTL1Q9NRR1 136 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 MBD2Q9UBB5 411 aa2.98□□□□□ -1.93
LINC00649-220ENST00000628906 C7orf66A4D0T2 115 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 C1orf196B1AJZ1 125 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 NDUFC2-KCTD14E9PQ53 114 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 K7EQM0 130 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 CRIP1P50238 77 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 NKX2-5P52952 324 aaPredicted RBP2.97□□□□□ -1.93
LINC00649-220ENST00000628906 OR10D4PQ8NGN7 298 aa2.97□□□□□ -1.93
LINC00649-220ENST00000628906 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms