RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CIDEAO60543 219 aa9.08□□□□□ -0.96
SYNGAP1-207ENST00000628646 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
SYNGAP1-207ENST00000628646 PRADC1Q9BSG0 188 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 GEMIN7Q9H840 131 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 A0A0J9YY99 117 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 RPL36AP83881 106 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 PMVKQ15126 192 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 FAM222AQ5U5X8 452 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 RPL36ALQ969Q0 106 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 RBMY1DP0C7P1 496 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 C11orf45Q8TAV5 145 aa9.07□□□□□ -0.96
SYNGAP1-207ENST00000628646 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 TAX1BP3O14907 124 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 UBE2L6O14933 153 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 MRPL35Q9NZE8 188 aaKnown RBP9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 IGHV4-28A0A0C4DH34 117 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 CCL25O15444 150 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 FABP2P12104 132 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 HHLA3Q9XRX5 114 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 MUC4Q99102 2169 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 TRAV12-1A0A0B4J245 112 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 DEFB104AQ8WTQ1 72 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
SYNGAP1-207ENST00000628646 MIFP14174 115 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 TMEM262E9PQX1 116 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 BOD1L2Q8IYS8 172 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 ATP5G1P05496 136 aa9.05□□□□□ -0.96
SYNGAP1-207ENST00000628646 H3BRM9 83 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 ODF1Q14990 250 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 A0A096LPF7 62 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 Q6ZTI0 123 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 TOMM6Q96B49 74 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 K7EIL1 84 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
SYNGAP1-207ENST00000628646 TEX48A0A1B0GUV7 120 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 A0A0J9YWU9 116 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 RASL10AQ92737 203 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 GAGE12JA6NER3 117 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 ZNF815PA8K554 130 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 J3QR89 54 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 PAX4O43316 350 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 GAGE4Q13068 117 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 GAGE5Q13069 117 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 GAGE13Q4V321 117 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 SBSPONQ8IVN8 264 aa9.03□□□□□ -0.96
SYNGAP1-207ENST00000628646 POM121L12Q8N7R1 296 aa9.02□□□□□ -0.96
SYNGAP1-207ENST00000628646 ZFP2Q6ZN57 461 aa9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 RAB37Q96AX2 223 aa9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 PRSS29PA6NIE9 313 aa9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 AMTNQ6UX39 209 aa9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 PHLDA1Q8WV24 401 aaPredicted RBP9.02□□□□□ -0.97
SYNGAP1-207ENST00000628646 IGKV2D-26A0A0A0MRZ7 120 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 TAL2Q16559 108 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 RNF183Q96D59 192 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 NXPH4O95158 308 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 LINC00315P59091 139 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 IGLL5B9A064 214 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 COPS9Q8WXC6 57 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 CHAC1Q9BUX1 264 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 KIF25-AS1Q9Y6Z4 181 aa9.01□□□□□ -0.97
SYNGAP1-207ENST00000628646 UBE2V1Q13404 147 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 PIK3CD-AS1Q5SR53 167 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 PCP2Q8IVA1 136 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 C9orf85Q96MD7 179 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 IGKV3OR2-268A0A0C4DH90 116 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 TRBV6-5A0A0K0K1A5 114 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 SCGB1C2P0DMR2 95 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 NBEAL2Q6ZNJ1 2754 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 EGFEM1PQ0D2K5 195 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 JPT2Q9H910 190 aa9□□□□□ -0.97
SYNGAP1-207ENST00000628646 Q1RN00 199 aa8.99□□□□□ -0.97
SYNGAP1-207ENST00000628646 ZNRF2Q8NHG8 242 aa8.99□□□□□ -0.97
SYNGAP1-207ENST00000628646 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
SYNGAP1-207ENST00000628646 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
SYNGAP1-207ENST00000628646 LYRM9A8MSI8 78 aa8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 DEFB131BA0A096LNP1 70 aa8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 NANOS2P60321 138 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 NHP2Q9NX24 153 aaKnown RBP8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
SYNGAP1-207ENST00000628646 C19orf73Q9NVV2 129 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms