RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 LEPROTO15243 131 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 ITPR3Q14573 2671 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 A8MZ25 164 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 RHODO00212 210 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 P0DMU3 169 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 FAM231AP0DMU4 169 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 FAM231CP0DMU5 169 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 FAM19A4Q96LR4 140 aa11.97□□□□□ -0.49
NRXN1-229ENST00000628515 LINC01620Q4KN68 170 aa11.96□□□□□ -0.49
NRXN1-229ENST00000628515 TRBV27A0A0K0K1C4 114 aa11.96□□□□□ -0.49
NRXN1-229ENST00000628515 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.49
NRXN1-229ENST00000628515 CD28P10747 220 aa11.96□□□□□ -0.49
NRXN1-229ENST00000628515 RPL32P62910 135 aaKnown RBP11.96□□□□□ -0.49
NRXN1-229ENST00000628515 TTC32Q5I0X7 151 aa11.96□□□□□ -0.49
NRXN1-229ENST00000628515 GCN1Q92616 2671 aaKnown RBP11.96□□□□□ -0.5
NRXN1-229ENST00000628515 ATXN8Q156A1 80 aa11.96□□□□□ -0.5
NRXN1-229ENST00000628515 KLLNB2CW77 178 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 SBSPONQ8IVN8 264 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 KNCNA6PVL3 124 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 M0QY20 66 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 WNK1Q9H4A3 2382 aa11.95□□□□□ -0.5
NRXN1-229ENST00000628515 TRAV8-4A0A0B4J246 113 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 TRIAP1O43715 76 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 NXPH4O95158 308 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 TIMM21Q9BVV7 248 aa11.94□□□□□ -0.5
NRXN1-229ENST00000628515 PRM2P04554 102 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 PROK1P58294 105 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 DAND5Q8N907 189 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 IGLV4-3A0A075B6K6 122 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 IGHV3-16A0A0C4DH30 117 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 LGALS9O00182 355 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 IGHV3-30-3P0DP02 117 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 CLEC2BQ92478 149 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
NRXN1-229ENST00000628515 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.92□□□□□ -0.5
NRXN1-229ENST00000628515 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
NRXN1-229ENST00000628515 USMG5Q96IX5 58 aa11.92□□□□□ -0.5
NRXN1-229ENST00000628515 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
NRXN1-229ENST00000628515 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
NRXN1-229ENST00000628515 POM121L12Q8N7R1 296 aa11.92□□□□□ -0.5
NRXN1-229ENST00000628515 I3L3M4 83 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 C19orf54Q5BKX5 351 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 APRG1Q8IVJ8 170 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 H3BMM0 161 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 M0R2P5 195 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 NHLRC4P0CG21 123 aaPredicted RBP11.91□□□□□ -0.5
NRXN1-229ENST00000628515 UBE2WQ96B02 151 aa11.91□□□□□ -0.5
NRXN1-229ENST00000628515 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
NRXN1-229ENST00000628515 AVPP01185 164 aa11.9□□□□□ -0.5
NRXN1-229ENST00000628515 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
NRXN1-229ENST00000628515 NDUFV3P56181 108 aaKnown RBP11.9□□□□□ -0.5
NRXN1-229ENST00000628515 DCANP1Q8TF63 244 aa11.9□□□□□ -0.5
NRXN1-229ENST00000628515 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.51
NRXN1-229ENST00000628515 HIST2H2BDQ6DRA6 164 aa11.9□□□□□ -0.51
NRXN1-229ENST00000628515 CITED1Q99966 193 aa11.9□□□□□ -0.51
NRXN1-229ENST00000628515 NDUFA12Q9UI09 145 aa11.9□□□□□ -0.51
NRXN1-229ENST00000628515 RHOHQ15669 191 aa11.89□□□□□ -0.51
NRXN1-229ENST00000628515 FLNBO75369 2602 aaKnown RBP11.89□□□□□ -0.51
NRXN1-229ENST00000628515 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
NRXN1-229ENST00000628515 DUX3Q96PT4 197 aa11.89□□□□□ -0.51
NRXN1-229ENST00000628515 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 SNRPD3P62318 126 aaKnown RBP11.88□□□□□ -0.51
NRXN1-229ENST00000628515 Q9UF83 564 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 IGHV3-38A0A0C4DH36 116 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 IGHG2P01859 326 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 C10orf105Q8TEF2 133 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 ICOSQ9Y6W8 199 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 IFITM1P13164 125 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
NRXN1-229ENST00000628515 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
NRXN1-229ENST00000628515 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.87□□□□□ -0.51
NRXN1-229ENST00000628515 IGKV2-29A2NJV5 120 aaPredicted RBP11.87□□□□□ -0.51
NRXN1-229ENST00000628515 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
NRXN1-229ENST00000628515 COX6CP09669 75 aa11.86□□□□□ -0.51
NRXN1-229ENST00000628515 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
NRXN1-229ENST00000628515 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
NRXN1-229ENST00000628515 A0A0J9YX75 114 aa11.86□□□□□ -0.51
NRXN1-229ENST00000628515 ODF3Q96PU9 254 aa11.85□□□□□ -0.51
NRXN1-229ENST00000628515 FAM110AQ9BQ89 295 aa11.85□□□□□ -0.51
NRXN1-229ENST00000628515 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE7O76087 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE12FP0CL80 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE12GP0CL81 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE12IP0CL82 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 GAGE4Q13068 117 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 H7C423 109 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 RPL13AP40429 203 aaKnown RBP11.84□□□□□ -0.51
NRXN1-229ENST00000628515 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
NRXN1-229ENST00000628515 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
NRXN1-229ENST00000628515 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
NRXN1-229ENST00000628515 MSMBP08118 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms