RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
SOX2-OT-248ENST00000628496 Q8N976 141 aa9.07□□□□□ -0.96
SOX2-OT-248ENST00000628496 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 MRPL51Q4U2R6 128 aaKnown RBP9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 ATRAIDQ6UW56 229 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 SEC11CQ9BY50 192 aa9.06□□□□□ -0.96
SOX2-OT-248ENST00000628496 A0A087WTM6 91 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 AMTP48728 403 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 PKIAP61925 76 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 RBX1P62877 108 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 ELOBQ15370 118 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 NRACQ8N912 160 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
SOX2-OT-248ENST00000628496 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 PSCAO43653 123 aa9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 ANGP03950 147 aaKnown RBP9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 TMEM70Q9BUB7 260 aa9.04□□□□□ -0.96
SOX2-OT-248ENST00000628496 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 I3L3M4 83 aa9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 S100A8P05109 93 aa9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 C10orf91Q5T1B1 145 aa9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
SOX2-OT-248ENST00000628496 IGLV4-60A0A075B6I1 120 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 TSHBP01222 138 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 PMCHP20382 165 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 FUSP35637 526 aaKnown RBP eCLIP9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 C20orf203Q8NBC4 194 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 TMEM242Q9NWH2 141 aa9.02□□□□□ -0.97
SOX2-OT-248ENST00000628496 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 TRBV27A0A0K0K1C4 114 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 PPP1R17O96001 155 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 APCSP02743 223 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 CKS2P33552 79 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 Q0VG73 95 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 WFDC2Q14508 124 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 RMI2Q96E14 147 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 CTDSP1Q9GZU7 261 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 PRR34Q9NV39 138 aa9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 CARHSP1Q9Y2V2 147 aaKnown RBP9.01□□□□□ -0.97
SOX2-OT-248ENST00000628496 A0A1B0GUV1 79 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 D6R8Y8 96 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 UBE2L6O14933 153 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 CRPP02741 224 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 BTF3L4Q96K17 158 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 IMMP2LQ96T52 175 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 COX11Q9Y6N1 276 aa9□□□□□ -0.97
SOX2-OT-248ENST00000628496 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
SOX2-OT-248ENST00000628496 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
SOX2-OT-248ENST00000628496 ESDP10768 282 aa8.99□□□□□ -0.97
SOX2-OT-248ENST00000628496 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-248ENST00000628496 VCYO14598 125 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 LECT2O14960 151 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 NPYP01303 97 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 REG3AQ06141 175 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 MIAQ16674 131 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 Q8N814 137 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 CLRN3Q8NCR9 226 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
SOX2-OT-248ENST00000628496 C7orf77A4D0Y5 90 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 H7C423 109 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 PPBPP02775 128 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 FGF6P10767 208 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 RPL32P62910 135 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
SOX2-OT-248ENST00000628496 FCER1GP30273 86 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 RHEBQ15382 184 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 TMEM136Q6ZRR5 245 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 KIR2DL4Q99706 377 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 SMIM2Q9BVW6 85 aa8.96□□□□□ -0.98
SOX2-OT-248ENST00000628496 IGLV10-54A0A075B6I4 117 aa8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 TRAV9-1A0A075B6T8 112 aa8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 PHOX2AO14813 284 aa8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 RNASEKQ6P5S7 137 aaKnown RBP8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 PRELID3AQ96N28 172 aa8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 RPS10P5Q9NQ39 176 aa8.95□□□□□ -0.98
SOX2-OT-248ENST00000628496 APOC3P02656 99 aa8.94□□□□□ -0.98
SOX2-OT-248ENST00000628496 ZNF25P17030 456 aaPredicted RBP8.94□□□□□ -0.98
SOX2-OT-248ENST00000628496 S100PP25815 95 aa8.94□□□□□ -0.98
SOX2-OT-248ENST00000628496 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms