RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
NPLOC4-221ENST00000625705 TMEM191AQ9H0A3 160 aa4.91□□□□□ -1.62
NPLOC4-221ENST00000625705 ANGP03950 147 aaKnown RBP4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 BTF3P20290 206 aaKnown RBP4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 PMCHP20382 165 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 S100PP25815 95 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 GAGE6Q13070 117 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 FRZBQ92765 325 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 RPL39LQ96EH5 51 aaKnown RBP4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM243Q9BU79 118 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 ST20Q9HBF5 79 aa4.9□□□□□ -1.63
NPLOC4-221ENST00000625705 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 LINC00862A6NCI5 91 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 NCR2O95944 276 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 PPP1R17O96001 155 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 APCSP02743 223 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 NIT1Q86X76 327 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 RMI2Q96E14 147 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 SEC11CQ9BY50 192 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 KLK12Q9UKR0 248 aa4.89□□□□□ -1.63
NPLOC4-221ENST00000625705 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 IBA57-AS1B1ANH7 110 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 SMKR1H3BMG3 65 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 ADCYAP1P18509 176 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 RAB4AP20338 218 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 FCER1GP30273 86 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 CKS2P33552 79 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 LAGE3Q14657 143 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 AMMECR1LQ6DCA0 310 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 CLPSL2Q6UWE3 100 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 ATP5L2Q7Z4Y8 100 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 UBE2WQ96B02 151 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 BTF3L4Q96K17 158 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 CHCHD7Q9BUK0 85 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 TM2D2Q9BX73 214 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
NPLOC4-221ENST00000625705 IGKV2D-24A0A075B6R9 120 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 I3L3M4 83 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 IQCJQ1A5X6 159 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 MPV17L2Q567V2 206 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 NTM-AS1Q6ZSK4 140 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 RNF185Q96GF1 192 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 KIR2DL4Q99706 377 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 C1orf43Q9BWL3 253 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 RPS10P5Q9NQ39 176 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM242Q9NWH2 141 aa4.87□□□□□ -1.63
NPLOC4-221ENST00000625705 D6R8Y8 96 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 APOC3P02656 99 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 PPBPP02775 128 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 RPS10P46783 165 aaKnown RBP4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 SUMO2P61956 95 aaKnown RBP4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 RBX1P62877 108 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 Q0VG73 95 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 RHEBQ15382 184 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 MRPL51Q4U2R6 128 aaKnown RBP4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 ATRAIDQ6UW56 229 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 ORMDL3Q8N138 153 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 Q8N976 141 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM70Q9BUB7 260 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 COX11Q9Y6N1 276 aa4.86□□□□□ -1.63
NPLOC4-221ENST00000625705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 TRBV6-5A0A0K0K1A5 114 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 A0A1B0GXF2 115 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 IGKV2-29A2NJV5 120 aaPredicted RBP4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 C7orf77A4D0Y5 90 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 C16orf90A8MZG2 172 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 VCYO14598 125 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 GAS8-AS1O95177 125 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 SNAPINO95295 136 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 SMAGPQ0VAQ4 97 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 DGAT2L7PQ6IED9 249 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 SPATA12Q7Z6I5 190 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 SVBPQ8N300 66 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 CLRN3Q8NCR9 226 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM101Q96IK0 257 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 IMMP2LQ96T52 175 aa4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
NPLOC4-221ENST00000625705 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 TRAV9-1A0A075B6T8 112 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 TNFRSF6BO95407 300 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 RAB5AP20339 215 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 REG3AQ06141 175 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 MIAQ16674 131 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM136Q6ZRR5 245 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 LINC00269Q8N2A0 174 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 OR5A1Q8NGJ0 315 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 PRELID3AQ96N28 172 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 MAP1LC3AQ9H492 121 aa4.84□□□□□ -1.63
NPLOC4-221ENST00000625705 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 IGLV10-54A0A075B6I4 117 aa4.83□□□□□ -1.64
NPLOC4-221ENST00000625705 A0A087WTM6 91 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms