RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ESDP10768 282 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 UPK3BQ9BT76 320 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
PNKP-217ENST00000625216 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 PPP1R17O96001 155 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 ESRGQ1W209 222 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 TTC32Q5I0X7 151 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 NEGR1Q7Z3B1 354 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 Q8N8P6 123 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 SLC25A29Q8N8R3 303 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 PRSS3P2Q8NHM4 247 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 TMEM70Q9BUB7 260 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 ST20Q9HBF5 79 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
PNKP-217ENST00000625216 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
PNKP-217ENST00000625216 A0A096LPF7 62 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 LINC01546A6NGU7 62 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 PAX4O43316 350 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 LINC00614P0C842 121 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 BTF3P20290 206 aaKnown RBP8.71□□□□□ -1.02
PNKP-217ENST00000625216 POLR2KP53803 58 aaKnown RBP8.71□□□□□ -1.02
PNKP-217ENST00000625216 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
PNKP-217ENST00000625216 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
PNKP-217ENST00000625216 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
PNKP-217ENST00000625216 NXT2Q9NPJ8 142 aaKnown RBP8.71□□□□□ -1.02
PNKP-217ENST00000625216 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 PMCHP20382 165 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 PMCHL1Q16048 86 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 AP5S1Q9NUS5 200 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 HHLA3Q9XRX5 114 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 ICOSQ9Y6W8 199 aa8.7□□□□□ -1.02
PNKP-217ENST00000625216 A0A096LNJ9 63 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 IGHV1-24A0A0C4DH33 117 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 TCAPO15273 167 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 HSBP1O75506 76 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 AMTP48728 403 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 CRYBA4P53673 196 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 RHOHQ15669 191 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 FAM19A2Q8N3H0 131 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 TNFRSF18Q9Y5U5 241 aa8.69□□□□□ -1.02
PNKP-217ENST00000625216 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 GAGE1Q13065 139 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 GAGE4Q13068 117 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 GAGE5Q13069 117 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 MRPL23Q16540 153 aaKnown RBP8.68□□□□□ -1.02
PNKP-217ENST00000625216 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 HIST1H2BLQ99880 126 aa8.68□□□□□ -1.02
PNKP-217ENST00000625216 TSHBP01222 138 aa8.67□□□□□ -1.02
PNKP-217ENST00000625216 S100A2P29034 98 aa8.67□□□□□ -1.02
PNKP-217ENST00000625216 RPL36AP83881 106 aaKnown RBP8.67□□□□□ -1.02
PNKP-217ENST00000625216 RPL36ALQ969Q0 106 aaKnown RBP8.67□□□□□ -1.02
PNKP-217ENST00000625216 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 IGHV3-38A0A0C4DH36 116 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 VCYO14598 125 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 FABP4P15090 132 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 UBE2D3P61077 147 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 UBE2D2P62837 147 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 TNP2Q05952 138 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 PRADC1Q9BSG0 188 aa8.66□□□□□ -1.02
PNKP-217ENST00000625216 I3L3M4 83 aa8.65□□□□□ -1.02
PNKP-217ENST00000625216 SIVA1O15304 175 aa8.65□□□□□ -1.02
PNKP-217ENST00000625216 GYPEP15421 78 aa8.65□□□□□ -1.02
PNKP-217ENST00000625216 LAGE3Q14657 143 aa8.65□□□□□ -1.02
PNKP-217ENST00000625216 LINC00173Q6ZV60 143 aa8.65□□□□□ -1.02
PNKP-217ENST00000625216 HBDP02042 147 aa8.64□□□□□ -1.03
PNKP-217ENST00000625216 LYPD5Q6UWN5 251 aa8.64□□□□□ -1.03
PNKP-217ENST00000625216 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
PNKP-217ENST00000625216 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
PNKP-217ENST00000625216 K7EMI3 77 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 FCER1GP30273 86 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 SH2D6Q7Z4S9 175 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 OR10D4PQ8NGN7 298 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
PNKP-217ENST00000625216 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 TRAV9-2A0A087WT02 112 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 K7EP13 123 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 COTL1Q14019 142 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 NTM-AS1Q6ZSK4 140 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 CHCHD7Q9BUK0 85 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 RYR1P21817 5038 aa8.62□□□□□ -1.03
PNKP-217ENST00000625216 AKR1D1P51857 326 aa8.61□□□□□ -1.03
PNKP-217ENST00000625216 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
PNKP-217ENST00000625216 DAZ4Q86SG3 579 aaKnown RBP8.61□□□□□ -1.03
PNKP-217ENST00000625216 DAZ3Q9NR90 486 aaKnown RBP8.61□□□□□ -1.03
PNKP-217ENST00000625216 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
PNKP-217ENST00000625216 TIRAPP58753 221 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms