RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.32
PCF11-207ENST00000624931 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.32
PCF11-207ENST00000624931 A8MWV9 139 aa13.02□□□□□ -0.33
PCF11-207ENST00000624931 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
PCF11-207ENST00000624931 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.33
PCF11-207ENST00000624931 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.33
PCF11-207ENST00000624931 RAX2Q96IS3 184 aa13.02□□□□□ -0.33
PCF11-207ENST00000624931 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.33
PCF11-207ENST00000624931 SDHAF1A6NFY7 115 aa13.01□□□□□ -0.33
PCF11-207ENST00000624931 LEPROTO15243 131 aa13.01□□□□□ -0.33
PCF11-207ENST00000624931 IGKV3-7A0A075B6H7 116 aa13□□□□□ -0.33
PCF11-207ENST00000624931 J3QQQ9 107 aa13□□□□□ -0.33
PCF11-207ENST00000624931 CRYBA4P53673 196 aa13□□□□□ -0.33
PCF11-207ENST00000624931 CKS1BP61024 79 aa13□□□□□ -0.33
PCF11-207ENST00000624931 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
PCF11-207ENST00000624931 F5H697 171 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 CFC1BP0CG36 223 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 CFC1P0CG37 223 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 INSL3P51460 131 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
PCF11-207ENST00000624931 C9orf85Q96MD7 179 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 A0A0J9YX75 114 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
PCF11-207ENST00000624931 F6UB75 175 aa12.98□□□□□ -0.33
PCF11-207ENST00000624931 SPRY2O43597 315 aa12.98□□□□□ -0.33
PCF11-207ENST00000624931 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
PCF11-207ENST00000624931 A0A0B4J2C4 111 aa12.97□□□□□ -0.33
PCF11-207ENST00000624931 SCGB1C2P0DMR2 95 aa12.97□□□□□ -0.33
PCF11-207ENST00000624931 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
PCF11-207ENST00000624931 JMJD1CQ15652 2540 aa12.97□□□□□ -0.33
PCF11-207ENST00000624931 TCL1BO95988 128 aa12.96□□□□□ -0.33
PCF11-207ENST00000624931 AMELXQ99217 191 aa12.96□□□□□ -0.33
PCF11-207ENST00000624931 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 TMEM223A0PJW6 202 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 CCL24O00175 119 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 SPINK8P0C7L1 97 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 ZNF688P0C7X2 276 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 P0DMU3 169 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 FAM231AP0DMU4 169 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 FAM231CP0DMU5 169 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 ZNRF2Q8NHG8 242 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 MAST4O15021 2626 aa12.96□□□□□ -0.34
PCF11-207ENST00000624931 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
PCF11-207ENST00000624931 FHL3Q13643 280 aa12.95□□□□□ -0.34
PCF11-207ENST00000624931 LINC01600Q96MT4 127 aa12.95□□□□□ -0.34
PCF11-207ENST00000624931 M0QY20 66 aa12.94□□□□□ -0.34
PCF11-207ENST00000624931 DCANP1Q8TF63 244 aa12.94□□□□□ -0.34
PCF11-207ENST00000624931 WFDC12Q8WWY7 111 aa12.94□□□□□ -0.34
PCF11-207ENST00000624931 TSPEAR-AS2P59090 65 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 DEFB1P60022 68 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 Q6ZUT4 128 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 EDA2RQ9HAV5 297 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 A0A087WWL8 130 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 I3L3M4 83 aa12.93□□□□□ -0.34
PCF11-207ENST00000624931 SNRPD3P62318 126 aaKnown RBP12.93□□□□□ -0.34
PCF11-207ENST00000624931 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
PCF11-207ENST00000624931 NIPBLQ6KC79 2804 aaeCLIP12.92□□□□□ -0.346e-27■□□□□ 8.6
PCF11-207ENST00000624931 TRAV12-3A0A0B4J271 114 aa12.92□□□□□ -0.34
PCF11-207ENST00000624931 ZNF56Q15929 161 aa12.92□□□□□ -0.34
PCF11-207ENST00000624931 C20orf203Q8NBC4 194 aa12.92□□□□□ -0.34
PCF11-207ENST00000624931 WNK1Q9H4A3 2382 aa12.92□□□□□ -0.34
PCF11-207ENST00000624931 IGHV3-33P01772 117 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 EMP1P54849 157 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
PCF11-207ENST00000624931 JPT2Q9H910 190 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 PYGO1Q9Y3Y4 419 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 IGHV1OR15-1A0A075B7D0 117 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 RHODO00212 210 aa12.91□□□□□ -0.34
PCF11-207ENST00000624931 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
PCF11-207ENST00000624931 A4D1N5 150 aa12.9□□□□□ -0.34
PCF11-207ENST00000624931 PEMTQ9UBM1 199 aa12.9□□□□□ -0.34
PCF11-207ENST00000624931 M0R2P5 195 aa12.89□□□□□ -0.35
PCF11-207ENST00000624931 SLC25A20O43772 301 aa12.89□□□□□ -0.35
PCF11-207ENST00000624931 ZNF22P17026 224 aaPredicted RBP12.89□□□□□ -0.35
PCF11-207ENST00000624931 ATXN8Q156A1 80 aa12.89□□□□□ -0.35
PCF11-207ENST00000624931 KRTAP24-1Q3LI83 254 aa12.88□□□□□ -0.35
PCF11-207ENST00000624931 ANKRD29Q8N6D5 301 aa12.88□□□□□ -0.35
PCF11-207ENST00000624931 MUC4Q99102 2169 aa12.88□□□□□ -0.35
PCF11-207ENST00000624931 FAM74A4Q5TZK3 123 aa12.88□□□□□ -0.35
PCF11-207ENST00000624931 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
PCF11-207ENST00000624931 TENM1Q9UKZ4 2725 aa12.87□□□□□ -0.35
PCF11-207ENST00000624931 MT-ATP8P03928 68 aa12.87□□□□□ -0.35
PCF11-207ENST00000624931 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
PCF11-207ENST00000624931 DYNLRB2Q8TF09 96 aa12.87□□□□□ -0.35
PCF11-207ENST00000624931 PTH2Q96A98 100 aa12.87□□□□□ -0.35
PCF11-207ENST00000624931 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 K7EQG2 157 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 XGP55808 180 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 MUSTN1Q8IVN3 82 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 RNF183Q96D59 192 aa12.86□□□□□ -0.35
PCF11-207ENST00000624931 IGLV4-3A0A075B6K6 122 aa12.85□□□□□ -0.35
PCF11-207ENST00000624931 TRAV2A0A0B4J234 112 aa12.85□□□□□ -0.35
PCF11-207ENST00000624931 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
PCF11-207ENST00000624931 Q8N1Y9 231 aa12.85□□□□□ -0.35
PCF11-207ENST00000624931 C9JAW5 83 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms