RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 BPESC1Q9GZL8 116 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 A8MZ25 164 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 H3BUA1 57 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 CEMP1Q6PRD7 247 aaPredicted RBP10.38□□□□□ -0.75
LDB3-209ENST00000623056 TMEM61Q8N0U2 210 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 CHCHD5Q9BSY4 110 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
LDB3-209ENST00000623056 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
LDB3-209ENST00000623056 RNASE13Q5GAN3 156 aaKnown RBP10.37□□□□□ -0.75
LDB3-209ENST00000623056 BRD3OSQ6XYD6 125 aa10.37□□□□□ -0.75
LDB3-209ENST00000623056 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
LDB3-209ENST00000623056 TRBV7-7A0A0K0K1E9 115 aa10.36□□□□□ -0.75
LDB3-209ENST00000623056 LY6EQ16553 131 aa10.36□□□□□ -0.75
LDB3-209ENST00000623056 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
LDB3-209ENST00000623056 IGHG2P01859 326 aa10.35□□□□□ -0.75
LDB3-209ENST00000623056 GNLYP22749 145 aa10.35□□□□□ -0.75
LDB3-209ENST00000623056 CFAP46Q8IYW2 2715 aa10.35□□□□□ -0.75
LDB3-209ENST00000623056 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
LDB3-209ENST00000623056 YAE1D1Q9NRH1 226 aa10.35□□□□□ -0.75
LDB3-209ENST00000623056 SPINK13Q1W4C9 94 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 K7EMT4 169 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 AKAP6Q13023 2319 aa10.34□□□□□ -0.75
LDB3-209ENST00000623056 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
LDB3-209ENST00000623056 DAND5Q8N907 189 aa10.33□□□□□ -0.76
LDB3-209ENST00000623056 SPTAN1Q13813 2472 aaKnown RBP10.33□□□□□ -0.76
LDB3-209ENST00000623056 BLCAPP62952 87 aa10.33□□□□□ -0.76
LDB3-209ENST00000623056 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 PROK1P58294 105 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 C3orf56Q8N813 242 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 TMEM101Q96IK0 257 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 LINC01587Q99440 93 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 CELSR1Q9NYQ6 3014 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 ABCA2Q9BZC7 2435 aa10.32□□□□□ -0.76
LDB3-209ENST00000623056 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
LDB3-209ENST00000623056 TIMM17BO60830 172 aa10.31□□□□□ -0.76
LDB3-209ENST00000623056 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
LDB3-209ENST00000623056 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
LDB3-209ENST00000623056 EDA2RQ9HAV5 297 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 FAM236AA0A1B0GUQ0 79 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 FAM236BA0A1B0GV22 79 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 H3BUX3 64 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
LDB3-209ENST00000623056 A6NDX4 124 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 TMEM126AQ9H061 195 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 DOPEY2Q9Y3R5 2298 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 DUX5Q96PT3 197 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 Q9UF83 564 aa10.29□□□□□ -0.76
LDB3-209ENST00000623056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
LDB3-209ENST00000623056 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
LDB3-209ENST00000623056 ACYP1P07311 99 aa10.28□□□□□ -0.76
LDB3-209ENST00000623056 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
LDB3-209ENST00000623056 K7EQG2 157 aa10.28□□□□□ -0.76
LDB3-209ENST00000623056 NDUFA1O15239 70 aa10.28□□□□□ -0.76
LDB3-209ENST00000623056 IMUPQ9GZP8 106 aa10.28□□□□□ -0.76
LDB3-209ENST00000623056 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.76
LDB3-209ENST00000623056 CFHR3Q02985 330 aa10.27□□□□□ -0.77
LDB3-209ENST00000623056 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
LDB3-209ENST00000623056 CDKN2A-AS1Q9UH64 79 aa10.27□□□□□ -0.77
LDB3-209ENST00000623056 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
LDB3-209ENST00000623056 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
LDB3-209ENST00000623056 HTN1P15515 57 aa10.27□□□□□ -0.77
LDB3-209ENST00000623056 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
LDB3-209ENST00000623056 SORL1Q92673 2214 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 KNCNA6PVL3 124 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 COX7A2LO14548 114 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 Q6ZSN1 163 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 LINC00308Q8TCZ7 52 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 LINC00467Q9BRT7 94 aa10.26□□□□□ -0.77
LDB3-209ENST00000623056 VPS13CQ709C8 3753 aa10.25□□□□□ -0.77
LDB3-209ENST00000623056 TMEM95Q3KNT9 176 aa10.25□□□□□ -0.77
LDB3-209ENST00000623056 CIRBPQ14011 172 aaKnown RBP10.24□□□□□ -0.77
LDB3-209ENST00000623056 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
LDB3-209ENST00000623056 FLNCQ14315 2725 aa10.24□□□□□ -0.77
LDB3-209ENST00000623056 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.24□□□□□ -0.77
LDB3-209ENST00000623056 RNF152Q8N8N0 203 aa10.24□□□□□ -0.77
LDB3-209ENST00000623056 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 VPREB3Q9UKI3 123 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 TIRAPP58753 221 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 Q8N2B8 174 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 Q9H8V8 135 aa10.23□□□□□ -0.77
LDB3-209ENST00000623056 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 PRM2P04554 102 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
LDB3-209ENST00000623056 DAZ4Q86SG3 579 aaKnown RBP10.22□□□□□ -0.77
LDB3-209ENST00000623056 C3orf22Q8N5N4 141 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
LDB3-209ENST00000623056 DAZ3Q9NR90 486 aaKnown RBP10.22□□□□□ -0.77
LDB3-209ENST00000623056 FASNP49327 2511 aaKnown RBP10.22□□□□□ -0.77
LDB3-209ENST00000623056 PSMB8P28062 276 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 COX6A2Q02221 97 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 C9orf153Q5TBE3 101 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms