RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 BAHCC1Q9P281 2608 aa13.52□□□□□ -0.24
PCDHB2-202ENST00000622947 TRBV7-3A0A075B6L6 115 aa13.52□□□□□ -0.24
PCDHB2-202ENST00000622947 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.24
PCDHB2-202ENST00000622947 SPATA3Q8NHX4 192 aa13.52□□□□□ -0.24
PCDHB2-202ENST00000622947 HERV-K104P63124 156 aa13.52□□□□□ -0.25
PCDHB2-202ENST00000622947 MORN3Q6PF18 240 aaPredicted RBP13.52□□□□□ -0.25
PCDHB2-202ENST00000622947 NRACQ8N912 160 aa13.52□□□□□ -0.25
PCDHB2-202ENST00000622947 C9orf85Q96MD7 179 aa13.52□□□□□ -0.25
PCDHB2-202ENST00000622947 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
PCDHB2-202ENST00000622947 TEP1Q99973 2627 aaKnown RBP13.51□□□□□ -0.25
PCDHB2-202ENST00000622947 CYSRT1A8MQ03 144 aa13.5□□□□□ -0.25
PCDHB2-202ENST00000622947 CARD19Q96LW7 228 aa13.5□□□□□ -0.25
PCDHB2-202ENST00000622947 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
PCDHB2-202ENST00000622947 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
PCDHB2-202ENST00000622947 LINC00315P59091 139 aa13.49□□□□□ -0.25
PCDHB2-202ENST00000622947 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
PCDHB2-202ENST00000622947 IGLV2-18A0A075B6J9 118 aa13.49□□□□□ -0.25
PCDHB2-202ENST00000622947 WFDC10AQ9H1F0 79 aa13.49□□□□□ -0.25
PCDHB2-202ENST00000622947 NHLRC4P0CG21 123 aaPredicted RBP13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 TEN1Q86WV5 123 aa13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 DPH3P1Q9H4G8 78 aa13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 HTN1P15515 57 aa13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 CITED1Q99966 193 aa13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 C19orf73Q9NVV2 129 aa13.48□□□□□ -0.25
PCDHB2-202ENST00000622947 TMEM262E9PQX1 116 aa13.47□□□□□ -0.25
PCDHB2-202ENST00000622947 Q8N8P6 123 aa13.47□□□□□ -0.25
PCDHB2-202ENST00000622947 PSMB2P49721 201 aa13.47□□□□□ -0.25
PCDHB2-202ENST00000622947 TRPT1Q86TN4 253 aaKnown RBP13.47□□□□□ -0.25
PCDHB2-202ENST00000622947 PF4P02776 101 aa13.46□□□□□ -0.25
PCDHB2-202ENST00000622947 BEAN1Q3B7T3 259 aa13.46□□□□□ -0.25
PCDHB2-202ENST00000622947 RASL10AQ92737 203 aa13.46□□□□□ -0.25
PCDHB2-202ENST00000622947 RPL32P62910 135 aaKnown RBP13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 STHQ8IWL8 128 aa13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 XCL2Q9UBD3 114 aa13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 A0A087WWL8 130 aa13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 MGPP08493 103 aa13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 MRPL35Q9NZE8 188 aaKnown RBP13.45□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE12JA6NER3 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 RHODO00212 210 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE7O76087 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE12FP0CL80 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE12GP0CL81 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE12IP0CL82 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE4Q13068 117 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 PTH2Q96A98 100 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 LYRM7Q5U5X0 104 aa13.44□□□□□ -0.26
PCDHB2-202ENST00000622947 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
PCDHB2-202ENST00000622947 SBSPONQ8IVN8 264 aa13.43□□□□□ -0.26
PCDHB2-202ENST00000622947 SMIM20Q8N5G0 67 aa13.43□□□□□ -0.26
PCDHB2-202ENST00000622947 PLNP26678 52 aa13.43□□□□□ -0.26
PCDHB2-202ENST00000622947 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
PCDHB2-202ENST00000622947 GIG44P09565 113 aaPredicted RBP13.42□□□□□ -0.26
PCDHB2-202ENST00000622947 UBE2D3P61077 147 aa13.42□□□□□ -0.26
PCDHB2-202ENST00000622947 UBE2D2P62837 147 aa13.42□□□□□ -0.26
PCDHB2-202ENST00000622947 NACAE9PAV3 2078 aa13.42□□□□□ -0.26
PCDHB2-202ENST00000622947 A0A087WX48 190 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 CRYGDP07320 174 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 NDUFV3P56181 108 aaKnown RBP13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 C1orf158Q8N1D5 194 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 FBN1P35555 2871 aaKnown RBP13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 LOC107984156A0A0G2JMH3 177 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 LINC01549A6NIU2 74 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 ZNF876PQ49A33 203 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 ARL17AQ8IVW1 177 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 LINC01587Q99440 93 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 TNFRSF18Q9Y5U5 241 aa13.41□□□□□ -0.26
PCDHB2-202ENST00000622947 A8MWV9 139 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 INSP01308 110 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 C11orf72Q8NBR9 251 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 FAM74A4Q5TZK3 123 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 ZFP2Q6ZN57 461 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
PCDHB2-202ENST00000622947 GAGE2BQ13066 116 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 GAGE2EQ4V326 116 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 GAGE2DQ9UEU5 116 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 UBE2D1P51668 147 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 LAGE3Q14657 143 aa13.39□□□□□ -0.27
PCDHB2-202ENST00000622947 TRBV20-1A0A075B6N2 111 aa13.38□□□□□ -0.27
PCDHB2-202ENST00000622947 CCDC179H3BU77 68 aa13.38□□□□□ -0.27
PCDHB2-202ENST00000622947 SUMO2P61956 95 aaKnown RBP13.38□□□□□ -0.27
PCDHB2-202ENST00000622947 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
PCDHB2-202ENST00000622947 KIR2DL4Q99706 377 aa13.37□□□□□ -0.27
PCDHB2-202ENST00000622947 ANKRD29Q8N6D5 301 aa13.37□□□□□ -0.27
PCDHB2-202ENST00000622947 IGHV3OR16-12A0A075B7B8 117 aa13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 IFITM1P13164 125 aa13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 CMC4P56277 68 aaPredicted RBP13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 SNCGO76070 127 aa13.36□□□□□ -0.27
PCDHB2-202ENST00000622947 F5H697 171 aa13.35□□□□□ -0.27
PCDHB2-202ENST00000622947 H7C1H1 209 aa13.35□□□□□ -0.27
PCDHB2-202ENST00000622947 Q6Q795 121 aa13.35□□□□□ -0.27
PCDHB2-202ENST00000622947 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
PCDHB2-202ENST00000622947 TCL1BO95988 128 aa13.35□□□□□ -0.27
PCDHB2-202ENST00000622947 F8VRH5 84 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms