RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
FAM3A-222ENST00000621967 ANK2Q01484 3957 aa12.77□□□□□ -0.37
FAM3A-222ENST00000621967 EDA2RQ9HAV5 297 aa12.76□□□□□ -0.37
FAM3A-222ENST00000621967 RBMY1A1P0DJD3 496 aaKnown RBP12.76□□□□□ -0.37
FAM3A-222ENST00000621967 RBMY1CP0DJD4 496 aa12.76□□□□□ -0.37
FAM3A-222ENST00000621967 RBMY1FQ15415 496 aaKnown RBP12.76□□□□□ -0.37
FAM3A-222ENST00000621967 ZNRF2Q8NHG8 242 aa12.76□□□□□ -0.37
FAM3A-222ENST00000621967 DLX4Q92988 240 aaPredicted RBP12.76□□□□□ -0.37
FAM3A-222ENST00000621967 P0DMU3 169 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 FAM231AP0DMU4 169 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 FAM231CP0DMU5 169 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 EMP1P54849 157 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 SCGB1D4Q6XE38 83 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 NFE4Q86UQ8 179 aa12.75□□□□□ -0.37
FAM3A-222ENST00000621967 UBE2D1P51668 147 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 TMEM238LA0A1B0GVL6 79 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 A6NJY4 79 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
FAM3A-222ENST00000621967 TRAV2A0A0B4J234 112 aa12.73□□□□□ -0.37
FAM3A-222ENST00000621967 A0A0J9YY99 117 aa12.73□□□□□ -0.37
FAM3A-222ENST00000621967 I3L3M4 83 aa12.73□□□□□ -0.37
FAM3A-222ENST00000621967 TSPEAR-AS2P59090 65 aa12.73□□□□□ -0.37
FAM3A-222ENST00000621967 F8W1H4 67 aa12.72□□□□□ -0.37
FAM3A-222ENST00000621967 SPANXB1Q9NS25 103 aaPredicted RBP12.72□□□□□ -0.37
FAM3A-222ENST00000621967 TRRAPQ9Y4A5 3859 aa12.72□□□□□ -0.37
FAM3A-222ENST00000621967 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
FAM3A-222ENST00000621967 AMELXQ99217 191 aa12.72□□□□□ -0.37
FAM3A-222ENST00000621967 KNCNA6PVL3 124 aa12.71□□□□□ -0.37
FAM3A-222ENST00000621967 TMEM170BQ5T4T1 132 aa12.71□□□□□ -0.37
FAM3A-222ENST00000621967 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-222ENST00000621967 H3BMM0 161 aa12.7□□□□□ -0.38
FAM3A-222ENST00000621967 DEFB131AP59861 70 aa12.7□□□□□ -0.38
FAM3A-222ENST00000621967 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
FAM3A-222ENST00000621967 VWFP04275 2813 aa12.7□□□□□ -0.38
FAM3A-222ENST00000621967 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
FAM3A-222ENST00000621967 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
FAM3A-222ENST00000621967 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
FAM3A-222ENST00000621967 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
FAM3A-222ENST00000621967 OPRPNQ99935 248 aaPredicted RBP12.7□□□□□ -0.38
FAM3A-222ENST00000621967 H3BMG7 143 aa12.69□□□□□ -0.38
FAM3A-222ENST00000621967 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
FAM3A-222ENST00000621967 PGPEP1Q9NXJ5 209 aa12.69□□□□□ -0.38
FAM3A-222ENST00000621967 TMEM223A0PJW6 202 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 J3QQQ9 107 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 SLC25A29Q8N8R3 303 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 PRO0461Q9UI25 63 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 IGLV4-3A0A075B6K6 122 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 PTH2Q96A98 100 aa12.68□□□□□ -0.38
FAM3A-222ENST00000621967 IGHV3-30P01768 117 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 IGHV3-30-5P0DP03 117 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 RPL24P83731 157 aaKnown RBP12.67□□□□□ -0.38
FAM3A-222ENST00000621967 WFDC2Q14508 124 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 TMEM61Q8N0U2 210 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 SPATA3Q8NHX4 192 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 PYGO1Q9Y3Y4 419 aa12.67□□□□□ -0.38
FAM3A-222ENST00000621967 LEPROTO15243 131 aa12.66□□□□□ -0.38
FAM3A-222ENST00000621967 DYNLRB2Q8TF09 96 aa12.66□□□□□ -0.38
FAM3A-222ENST00000621967 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
FAM3A-222ENST00000621967 A8MWV9 139 aa12.66□□□□□ -0.38
FAM3A-222ENST00000621967 M0R2P5 195 aa12.66□□□□□ -0.38
FAM3A-222ENST00000621967 ZNF22P17026 224 aaPredicted RBP12.66□□□□□ -0.38
FAM3A-222ENST00000621967 TSPAN13O95857 204 aa12.65□□□□□ -0.38
FAM3A-222ENST00000621967 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
FAM3A-222ENST00000621967 COTL1Q14019 142 aa12.65□□□□□ -0.38
FAM3A-222ENST00000621967 GAGE13Q4V321 117 aa12.65□□□□□ -0.38
FAM3A-222ENST00000621967 LINC00467Q9BRT7 94 aa12.65□□□□□ -0.38
FAM3A-222ENST00000621967 MAP6D1Q9H9H5 199 aa12.65□□□□□ -0.38
FAM3A-222ENST00000621967 RHODO00212 210 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 CRYBA4P53673 196 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 ZNF415Q09FC8 603 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 UBE2D3P61077 147 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 UBE2D2P62837 147 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 VCX2Q9H322 139 aa12.64□□□□□ -0.39
FAM3A-222ENST00000621967 HTN1P15515 57 aa12.63□□□□□ -0.39
FAM3A-222ENST00000621967 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
FAM3A-222ENST00000621967 IGHV3-73A0A0B4J1V6 119 aa12.62□□□□□ -0.39
FAM3A-222ENST00000621967 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
FAM3A-222ENST00000621967 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
FAM3A-222ENST00000621967 C11orf72Q8NBR9 251 aa12.62□□□□□ -0.39
FAM3A-222ENST00000621967 APOMO95445 188 aa12.61□□□□□ -0.39
FAM3A-222ENST00000621967 CFC1BP0CG36 223 aa12.61□□□□□ -0.39
FAM3A-222ENST00000621967 CFC1P0CG37 223 aa12.61□□□□□ -0.39
FAM3A-222ENST00000621967 DEFB114Q30KQ6 69 aa12.61□□□□□ -0.39
FAM3A-222ENST00000621967 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
FAM3A-222ENST00000621967 PRM2P04554 102 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 INSL3P51460 131 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
FAM3A-222ENST00000621967 ETDBQ3ZM63 59 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 CFAP126Q5VTH2 177 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 SH2D6Q7Z4S9 175 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
FAM3A-222ENST00000621967 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
FAM3A-222ENST00000621967 LYRM7Q5U5X0 104 aa12.59□□□□□ -0.39
FAM3A-222ENST00000621967 Q6ZSN1 163 aa12.59□□□□□ -0.39
FAM3A-222ENST00000621967 IGLV1-51P01701 117 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms