RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 LAGE3Q14657 143 aa13.23□□□□□ -0.29
SEMA6C-210ENST00000621728 M0QY20 66 aa13.22□□□□□ -0.29
SEMA6C-210ENST00000621728 SIVA1O15304 175 aa13.22□□□□□ -0.29
SEMA6C-210ENST00000621728 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
SEMA6C-210ENST00000621728 TRAV4A0A0B4J268 109 aa13.21□□□□□ -0.29
SEMA6C-210ENST00000621728 ZMAT4Q9H898 229 aa13.21□□□□□ -0.29
SEMA6C-210ENST00000621728 DKK2Q9UBU2 259 aa13.21□□□□□ -0.3
SEMA6C-210ENST00000621728 LINC00612Q8N6U2 182 aa13.2□□□□□ -0.3
SEMA6C-210ENST00000621728 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
SEMA6C-210ENST00000621728 RHODO00212 210 aa13.19□□□□□ -0.3
SEMA6C-210ENST00000621728 NPSP0C0P6 89 aa13.19□□□□□ -0.3
SEMA6C-210ENST00000621728 ORMDL2Q53FV1 153 aa13.19□□□□□ -0.3
SEMA6C-210ENST00000621728 NEGR1Q7Z3B1 354 aa13.19□□□□□ -0.3
SEMA6C-210ENST00000621728 SMIM2Q9BVW6 85 aa13.19□□□□□ -0.3
SEMA6C-210ENST00000621728 LINC01549A6NIU2 74 aa13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 RPL32P62910 135 aaKnown RBP13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 BVES-AS1Q5T3Y7 98 aa13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 ZFP2Q6ZN57 461 aa13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 BOD1L2Q8IYS8 172 aa13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
SEMA6C-210ENST00000621728 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 NUDT3O95989 172 aa13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 ODF1Q14990 250 aa13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 COX11Q9Y6N1 276 aa13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 SUMO2P61956 95 aaKnown RBP13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 MPV17L2Q567V2 206 aa13.17□□□□□ -0.3
SEMA6C-210ENST00000621728 PRSS1P07477 247 aa13.16□□□□□ -0.3
SEMA6C-210ENST00000621728 FGF6P10767 208 aa13.16□□□□□ -0.3
SEMA6C-210ENST00000621728 RBX1P62877 108 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 C2orf91Q6ZV80 131 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 TM2D3Q9BRN9 247 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 SEC11AP67812 179 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 FHL2Q14192 279 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 MEGF8Q7Z7M0 2845 aa13.15□□□□□ -0.3
SEMA6C-210ENST00000621728 COL7A1Q02388 2944 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 TRAV12-1A0A0B4J245 112 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 CIDEAO60543 219 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 DPM2O94777 84 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 IGKCP01834 107 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 DAD1P61803 113 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 C18orf15Q96N68 181 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 EDA2RQ9HAV5 297 aa13.14□□□□□ -0.31
SEMA6C-210ENST00000621728 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 SPART-AS1P0CW21 52 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 SPATA25Q9BR10 227 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 TRBV6-5A0A0K0K1A5 114 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 LOC100131303A0A0U1RQF7 123 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 SDHAF1A6NFY7 115 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 H7C1H1 209 aa13.13□□□□□ -0.31
SEMA6C-210ENST00000621728 K7EP13 123 aa13.12□□□□□ -0.31
SEMA6C-210ENST00000621728 K7EQD1 137 aa13.12□□□□□ -0.31
SEMA6C-210ENST00000621728 POLR2KP53803 58 aaKnown RBP13.12□□□□□ -0.31
SEMA6C-210ENST00000621728 TOMM6Q96B49 74 aa13.12□□□□□ -0.31
SEMA6C-210ENST00000621728 A0A087WX48 190 aa13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 PLNP26678 52 aa13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 TMEM97Q5BJF2 176 aa13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 HSD52Q0P140 79 aa13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 HHLA3Q9XRX5 114 aa13.11□□□□□ -0.31
SEMA6C-210ENST00000621728 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-210ENST00000621728 HIGD1BQ9P298 99 aa13.1□□□□□ -0.31
SEMA6C-210ENST00000621728 TNFRSF18Q9Y5U5 241 aa13.1□□□□□ -0.31
SEMA6C-210ENST00000621728 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
SEMA6C-210ENST00000621728 IGHV3-38A0A0C4DH36 116 aa13.09□□□□□ -0.31
SEMA6C-210ENST00000621728 HTN3P15516 51 aa13.09□□□□□ -0.31
SEMA6C-210ENST00000621728 ZNRF2Q8NHG8 242 aa13.09□□□□□ -0.31
SEMA6C-210ENST00000621728 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
SEMA6C-210ENST00000621728 GAGE12JA6NER3 117 aa13.08□□□□□ -0.32
SEMA6C-210ENST00000621728 GAGE4Q13068 117 aa13.08□□□□□ -0.32
SEMA6C-210ENST00000621728 GAGE5Q13069 117 aa13.08□□□□□ -0.32
SEMA6C-210ENST00000621728 UBE2V1Q13404 147 aa13.08□□□□□ -0.32
SEMA6C-210ENST00000621728 GAGE13Q4V321 117 aa13.08□□□□□ -0.32
SEMA6C-210ENST00000621728 TRBV27A0A0K0K1C4 114 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 A6NDN8 102 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 TAX1BP3O14907 124 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 TP73-AS1Q9UF72 201 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 TRBV6-4A0A1B0GX49 114 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 VCYO14598 125 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
SEMA6C-210ENST00000621728 F8VRH5 84 aa13.06□□□□□ -0.32
SEMA6C-210ENST00000621728 ATP5G1P05496 136 aa13.06□□□□□ -0.32
SEMA6C-210ENST00000621728 NMUP48645 174 aa13.06□□□□□ -0.32
SEMA6C-210ENST00000621728 B9D2Q9BPU9 175 aa13.06□□□□□ -0.32
SEMA6C-210ENST00000621728 PRKDCP78527 4128 aaKnown RBP13.06□□□□□ -0.32
SEMA6C-210ENST00000621728 TSHBP01222 138 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 CRYBA4P53673 196 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 NANOS2P60321 138 aaKnown RBP13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 DNAJC30Q96LL9 226 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 A0A0J9YY99 117 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 F5H768 121 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 RHOHQ15669 191 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 Q6ZTC4 211 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 ERASQ7Z444 233 aa13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 MRPL35Q9NZE8 188 aaKnown RBP13.05□□□□□ -0.32
SEMA6C-210ENST00000621728 TRBV7-3A0A075B6L6 115 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms