RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TOMM6Q96B49 74 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 ZANQ9Y493 2812 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 H3BMM0 161 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 I3L3M4 83 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 NDUFA4O00483 81 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 IGHV4-38-2P0DP08 117 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 DEFB112Q30KQ8 113 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 NDUFA11Q86Y39 141 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 UBE2WQ96B02 151 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 CFC1BP0CG36 223 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 CFC1P0CG37 223 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 TSPEAR-AS2P59090 65 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 LMO4P61968 165 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 DEFB136Q30KP8 78 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 LAMTOR3Q9UHA4 124 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 ITPR1Q14643 2758 aa5.25□□□□□ -1.57
NEDD9-216ENST00000620854 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 LEPROTO15243 131 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 C11orf71Q6IPW1 123 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 GAGE7O76087 117 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 GAGE12FP0CL80 117 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 GAGE12GP0CL81 117 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 GAGE12IP0CL82 117 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 TEN1Q86WV5 123 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 TMEM141Q96I45 108 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.24□□□□□ -1.57
NEDD9-216ENST00000620854 A0A0J9YY99 117 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 IGKV2-29A2NJV5 120 aaPredicted RBP5.24□□□□□ -1.57
NEDD9-216ENST00000620854 A4D1N5 150 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 LINC01546A6NGU7 62 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 IGHV4-59P01825 116 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 CRYGDP07320 174 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 ZNF580Q9UK33 172 aa5.24□□□□□ -1.57
NEDD9-216ENST00000620854 A0A096LPF7 62 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 TRAV12-1A0A0B4J245 112 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 C3orf56Q8N813 242 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 GAGE6Q13070 117 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 TSHBP01222 138 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 UBE2D1P51668 147 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 PSMG3-AS1Q96PY0 264 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 SIRPDQ9H106 197 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 VPREB3Q9UKI3 123 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 RBAKDNA6NC62 111 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 CLPSL2Q6UWE3 100 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 ZFAND2AQ8N6M9 145 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 DAND5Q8N907 189 aa5.23□□□□□ -1.57
NEDD9-216ENST00000620854 FLNBO75369 2602 aaKnown RBP5.22□□□□□ -1.57
NEDD9-216ENST00000620854 ODF3BA8MYP8 253 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 EDN2P20800 178 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 C9orf47Q6ZRZ4 202 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 TEX49A0A1B0GTD5 131 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 ELANEP08246 267 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 SRSF2Q01130 221 aaKnown RBP5.22□□□□□ -1.57
NEDD9-216ENST00000620854 AJUBAQ96IF1 538 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 TRAV4A0A0B4J268 109 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 RHODO00212 210 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 CRLF1O75462 422 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 C9orf153Q5TBE3 101 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 C15orf53Q8NAA6 179 aa5.22□□□□□ -1.57
NEDD9-216ENST00000620854 RNASE3P12724 160 aaKnown RBP5.21□□□□□ -1.57
NEDD9-216ENST00000620854 Q6ZSV7 163 aa5.21□□□□□ -1.57
NEDD9-216ENST00000620854 GPHB5Q86YW7 130 aa5.21□□□□□ -1.57
NEDD9-216ENST00000620854 MUSTN1Q8IVN3 82 aa5.21□□□□□ -1.57
NEDD9-216ENST00000620854 LRRC75A-AS1Q8N1F1 130 aa5.21□□□□□ -1.57
NEDD9-216ENST00000620854 IGLV4-69A0A075B6H9 119 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 TINCRA0A1B0GVN0 87 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 IGHV3-30P01768 117 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 IGHV3-30-5P0DP03 117 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 UBE2D3P61077 147 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 UBE2D2P62837 147 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 SUMO4Q6EEV6 95 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 HIST2H2BCQ6DN03 193 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 CEMP1Q6PRD7 247 aaPredicted RBP5.21□□□□□ -1.58
NEDD9-216ENST00000620854 APRG1Q8IVJ8 170 aa5.21□□□□□ -1.58
NEDD9-216ENST00000620854 BBC3Q96PG8 261 aaPredicted RBP5.21□□□□□ -1.58
NEDD9-216ENST00000620854 A8MZ25 164 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 Q8N6K4 173 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 MRPL53Q96EL3 112 aaKnown RBP5.2□□□□□ -1.58
NEDD9-216ENST00000620854 Q9H8V8 135 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 HOXD3P31249 432 aaPredicted RBP5.2□□□□□ -1.58
NEDD9-216ENST00000620854 PRM2P04554 102 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 PLA2G2AP14555 144 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 SLC25A29Q8N8R3 303 aa5.2□□□□□ -1.58
NEDD9-216ENST00000620854 IFITM1P13164 125 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 MDFICQ9P1T7 246 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 IGHV4-4A0A075B6R2 117 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 Q8N1Y9 231 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 WFDC11Q8NEX6 87 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 U3KQE9 123 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 FLNCQ14315 2725 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 UTP20O75691 2785 aaKnown RBP5.19□□□□□ -1.58
NEDD9-216ENST00000620854 IGIPA6NJ69 53 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 TMEM243Q9BU79 118 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 ACANP16112 2415 aa5.19□□□□□ -1.58
NEDD9-216ENST00000620854 ANKRD17O75179 2603 aaKnown RBP5.19□□□□□ -1.58
NEDD9-216ENST00000620854 A0A1W2PPR1 153 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 LINC01619G3V211 115 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 CCDC179H3BU77 68 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 H3BUA1 57 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 272.2 ms