RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 PRSS47A8MTI9 375 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 K7EP13 123 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 SIVA1O15304 175 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 POLR2KP53803 58 aaKnown RBP4.87□□□□□ -1.63
PSMB3-212ENST00000620309 GAGE1Q13065 139 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 GAGE4Q13068 117 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 GAGE5Q13069 117 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 LINC00336Q6ZUF6 198 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
PSMB3-212ENST00000620309 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
PSMB3-212ENST00000620309 LINC01546A6NGU7 62 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BKO60814 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 TSHBP01222 138 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BJP06899 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 BTF3P20290 206 aaKnown RBP4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BOP23527 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BBP33778 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 TIRAPP58753 221 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BDP58876 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 LINC00310P59036 64 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BCP62807 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST2H2BEQ16778 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 IQCJQ1A5X6 159 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.86□□□□□ -1.63
PSMB3-212ENST00000620309 DAZ4Q86SG3 579 aaKnown RBP4.86□□□□□ -1.63
PSMB3-212ENST00000620309 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BHQ93079 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 URB1-AS1Q96HZ7 61 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BNQ99877 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 HIST1H2BMQ99879 126 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 Q9H8V8 135 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 ST20Q9HBF5 79 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 DAZ3Q9NR90 486 aaKnown RBP4.86□□□□□ -1.63
PSMB3-212ENST00000620309 LINC00588Q9Y4M8 146 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 TNFRSF18Q9Y5U5 241 aa4.86□□□□□ -1.63
PSMB3-212ENST00000620309 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 M0R2N4 97 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 PMCHP20382 165 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 PKIAP61925 76 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 ESRGQ1W209 222 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 C1orf134Q5TEV5 83 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 NTM-AS1Q6ZSK4 140 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 ATP6V0E2Q8NHE4 81 aa4.85□□□□□ -1.63
PSMB3-212ENST00000620309 NXT2Q9NPJ8 142 aaKnown RBP4.85□□□□□ -1.63
PSMB3-212ENST00000620309 NBDYA0A0U1RRE5 68 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 I3L3M4 83 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 K7EMI3 77 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 IFI27P40305 119 aaPredicted RBP4.84□□□□□ -1.63
PSMB3-212ENST00000620309 Q0VG73 95 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 LYPD5Q6UWN5 251 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 NFE4Q86UQ8 179 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 Q8N8P6 123 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 GTSF1LQ9H1H1 148 aa4.84□□□□□ -1.63
PSMB3-212ENST00000620309 A0A096LNJ9 63 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 TRBV6-8A0A0A6YYG3 113 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 LOC389332A0A1B0GUA5 103 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 C1orf196B1AJZ1 125 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 VCYO14598 125 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 EREGO14944 169 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 ESDP10768 282 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 COTL1Q14019 142 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
PSMB3-212ENST00000620309 LELP1Q5T871 98 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 C6orf223Q8N319 242 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 KIR2DL4Q99706 377 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 CHCHD7Q9BUK0 85 aa4.83□□□□□ -1.64
PSMB3-212ENST00000620309 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 IGHV1-24A0A0C4DH33 117 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 TCAPO15273 167 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 SERF1AO75920 110 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 AMTP48728 403 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 RAB5BP61020 215 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 DEFB104AQ8WTQ1 72 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 CHCHD1Q96BP2 118 aaKnown RBP4.82□□□□□ -1.64
PSMB3-212ENST00000620309 AP5S1Q9NUS5 200 aa4.82□□□□□ -1.64
PSMB3-212ENST00000620309 A0A087WX48 190 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 A0A1B0GVY2 172 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 PRSS29PA6NIE9 313 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 FCER1GP30273 86 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 LAGE3Q14657 143 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 ORMDL2Q53FV1 153 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 RNASEKQ6P5S7 137 aaKnown RBP4.81□□□□□ -1.64
PSMB3-212ENST00000620309 Q6ZR54 194 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 FA2HQ7L5A8 372 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 C20orf203Q8NBC4 194 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 TMEM243Q9BU79 118 aa4.81□□□□□ -1.64
PSMB3-212ENST00000620309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.8□□□□□ -1.64
PSMB3-212ENST00000620309 IGKV2-29A2NJV5 120 aaPredicted RBP4.8□□□□□ -1.64
PSMB3-212ENST00000620309 UBE2L6O14933 153 aa4.8□□□□□ -1.64
PSMB3-212ENST00000620309 PSCAO43653 123 aa4.8□□□□□ -1.64
PSMB3-212ENST00000620309 DNAH10OSP0CZ25 163 aa4.8□□□□□ -1.64
PSMB3-212ENST00000620309 MPV17L2Q567V2 206 aa4.8□□□□□ -1.64
PSMB3-212ENST00000620309 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
PSMB3-212ENST00000620309 MRPL52Q86TS9 123 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms