RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 TRAV8-6A0A0B4J262 113 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 LINC00587B1AMM8 73 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 M0R381 172 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 SNAI2O43623 268 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 GATCO43716 136 aaKnown RBP4.13□□□□□ -1.75
SSX4B-202ENST00000619890 DNAH10OSP0CZ25 163 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 FABP4P15090 132 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 EVI2AP22794 236 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 RPS20P60866 119 aaKnown RBP4.13□□□□□ -1.75
SSX4B-202ENST00000619890 RPL19P84098 196 aaKnown RBP4.13□□□□□ -1.75
SSX4B-202ENST00000619890 UFSP1Q6NVU6 142 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 DAZAP1Q96EP5 407 aaKnown RBP4.13□□□□□ -1.75
SSX4B-202ENST00000619890 SFRP2Q96HF1 295 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 AP1S3Q96PC3 154 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 DERL1Q9BUN8 251 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 KRTAP1-5Q9BYS1 174 aa4.13□□□□□ -1.75
SSX4B-202ENST00000619890 IGHV3-38A0A0C4DH36 116 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 TRBV10-1A0A0K0K1A3 114 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 GRIFINA4D1Z8 144 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 IFITM10A6NMD0 228 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 TSTD3H0UI37 97 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 LINC00694P0DN24 101 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 LINC00315P59091 139 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 PKIAP61925 76 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
SSX4B-202ENST00000619890 LELP1Q5T871 98 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 FAM74A4Q5TZK3 123 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 WFDC10BQ8IUB3 73 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 ATP6V0E2Q8NHE4 81 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 PACRGQ96M98 296 aaPredicted RBP4.12□□□□□ -1.75
SSX4B-202ENST00000619890 GTSF1LQ9H1H1 148 aa4.12□□□□□ -1.75
SSX4B-202ENST00000619890 TRBV20OR9-2A0A075B6H5 130 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 IGHV3-73A0A0B4J1V6 119 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 PHOX2AO14813 284 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 IGLV2-8P01709 118 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 P01737 135 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 SMIM17P0DL12 118 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 RAB4BP61018 213 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 CACNG7P62955 275 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 LAGE3Q14657 143 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 ZNF56Q15929 161 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 PDZD11Q5EBL8 140 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 SPANXN1Q5VSR9 72 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 LINC01551Q86U37 167 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 OR10AG1Q8NH19 301 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 TMEM18Q96B42 140 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 HIST1H2BLQ99880 126 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 TRAPPC1Q9Y5R8 145 aa4.11□□□□□ -1.75
SSX4B-202ENST00000619890 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 F2Z2F3 143 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 H7C1H1 209 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 CRYGDP07320 174 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 IGLC6P0CF74 106 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 CAMPP49913 170 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 RPL36AP83881 106 aaKnown RBP4.1□□□□□ -1.75
SSX4B-202ENST00000619890 GAGE1Q13065 139 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 GAGE4Q13068 117 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 GAGE5Q13069 117 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 JOSD1Q15040 202 aaPredicted RBP4.1□□□□□ -1.75
SSX4B-202ENST00000619890 COX19Q49B96 90 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 FER1L6-AS1Q8NA97 138 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 OR2D3Q8NGH3 330 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 RPL36ALQ969Q0 106 aaKnown RBP4.1□□□□□ -1.75
SSX4B-202ENST00000619890 CHCHD7Q9BUK0 85 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 SAMD10Q9BYL1 202 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 MSRB1Q9NZV6 116 aa4.1□□□□□ -1.75
SSX4B-202ENST00000619890 TRBV7-3A0A075B6L6 115 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 PRYO14603 147 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 CTRLP40313 264 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 TMEM97Q5BJF2 176 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 Q5VSD8 79 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 PET117Q6UWS5 81 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.75
SSX4B-202ENST00000619890 C14orf178Q8N769 122 aaPredicted RBP4.09□□□□□ -1.75
SSX4B-202ENST00000619890 OCC1Q8TAD7 63 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 TPPP3Q9BW30 176 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 CNFNQ9BYD5 112 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 RPP21Q9H633 154 aaKnown RBP4.09□□□□□ -1.75
SSX4B-202ENST00000619890 JPT2Q9H910 190 aa4.09□□□□□ -1.75
SSX4B-202ENST00000619890 LRP2P98164 4655 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 IBA57-AS1B1ANH7 110 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 MT-ND6P03923 174 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 DDTP30046 118 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 UBE2D3P61077 147 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 UBE2D2P62837 147 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 LRP1Q07954 4544 aaKnown RBP4.08□□□□□ -1.76
SSX4B-202ENST00000619890 IQCJQ1A5X6 159 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 WDR73Q6P4I2 378 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 Q6ZSN1 163 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 FAM231DQ6ZW35 169 aa4.08□□□□□ -1.76
SSX4B-202ENST00000619890 OSTCQ9NRP0 149 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms