RNA–Protein interactions for RNA: ENST00000619587.1

LHX3-203, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-203ENST00000619587 PF4V1P10720 104 aa12.7□□□□□ -0.38
LHX3-203ENST00000619587 NRGNQ92686 78 aa12.7□□□□□ -0.38
LHX3-203ENST00000619587 CRYBG3Q68DQ2 2970 aa12.7□□□□□ -0.38
LHX3-203ENST00000619587 MIAQ16674 131 aa12.7□□□□□ -0.38
LHX3-203ENST00000619587 BRD3OSQ6XYD6 125 aa12.7□□□□□ -0.38
LHX3-203ENST00000619587 LY6EQ16553 131 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 IMUPQ9GZP8 106 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 IGHV3-73A0A0B4J1V6 119 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 LY6DQ14210 128 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 TMEM61Q8N0U2 210 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
LHX3-203ENST00000619587 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
LHX3-203ENST00000619587 MRPS36P82909 103 aaKnown RBP12.68□□□□□ -0.38
LHX3-203ENST00000619587 C3orf22Q8N5N4 141 aa12.68□□□□□ -0.38
LHX3-203ENST00000619587 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
LHX3-203ENST00000619587 NDUFA7O95182 113 aa12.68□□□□□ -0.38
LHX3-203ENST00000619587 PROK1P58294 105 aa12.67□□□□□ -0.38
LHX3-203ENST00000619587 CSDC2Q9Y534 153 aaKnown RBP12.67□□□□□ -0.38
LHX3-203ENST00000619587 LMO4P61968 165 aa12.67□□□□□ -0.38
LHX3-203ENST00000619587 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
LHX3-203ENST00000619587 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
LHX3-203ENST00000619587 VSIG2Q96IQ7 327 aa12.66□□□□□ -0.38
LHX3-203ENST00000619587 Q9UF83 564 aa12.66□□□□□ -0.38
LHX3-203ENST00000619587 ACYP1P07311 99 aa12.66□□□□□ -0.38
LHX3-203ENST00000619587 ADORA2A-AS1P86434 159 aa12.66□□□□□ -0.38
LHX3-203ENST00000619587 IGHV1OR15-1A0A075B7D0 117 aa12.65□□□□□ -0.38
LHX3-203ENST00000619587 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
LHX3-203ENST00000619587 UQCRQO14949 82 aa12.65□□□□□ -0.39
LHX3-203ENST00000619587 USMG5Q96IX5 58 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 IGF2RP11717 2491 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 NACAE9PAV3 2078 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 BLCAPP62952 87 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 HERVK_113P63121 156 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 SMCR5Q8TEV8 140 aa12.64□□□□□ -0.39
LHX3-203ENST00000619587 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
LHX3-203ENST00000619587 IGHG2P01859 326 aa12.63□□□□□ -0.39
LHX3-203ENST00000619587 CITED2Q99967 270 aaPredicted RBP12.63□□□□□ -0.39
LHX3-203ENST00000619587 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
LHX3-203ENST00000619587 HTN1P15515 57 aa12.62□□□□□ -0.39
LHX3-203ENST00000619587 LINC00643Q86TS7 51 aa12.62□□□□□ -0.39
LHX3-203ENST00000619587 LINC00526Q96FQ7 95 aa12.62□□□□□ -0.39
LHX3-203ENST00000619587 KLK5Q9Y337 293 aaPredicted RBP12.61□□□□□ -0.39
LHX3-203ENST00000619587 KNCNA6PVL3 124 aa12.61□□□□□ -0.39
LHX3-203ENST00000619587 ATP5J2P56134 94 aa12.61□□□□□ -0.39
LHX3-203ENST00000619587 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.6□□□□□ -0.39
LHX3-203ENST00000619587 IGKV2-29A2NJV5 120 aaPredicted RBP12.6□□□□□ -0.39
LHX3-203ENST00000619587 C5orf47Q569G3 176 aa12.6□□□□□ -0.39
LHX3-203ENST00000619587 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
LHX3-203ENST00000619587 PRM2P04554 102 aa12.6□□□□□ -0.39
LHX3-203ENST00000619587 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
LHX3-203ENST00000619587 J3KT08 172 aa12.58□□□□□ -0.4
LHX3-203ENST00000619587 CDKN2A-AS1Q9UH64 79 aa12.58□□□□□ -0.4
LHX3-203ENST00000619587 H3BUX3 64 aa12.58□□□□□ -0.4
LHX3-203ENST00000619587 ATP5G1P05496 136 aa12.58□□□□□ -0.4
LHX3-203ENST00000619587 LRRC75A-AS1Q8N1F1 130 aa12.58□□□□□ -0.4
LHX3-203ENST00000619587 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
LHX3-203ENST00000619587 RBMY1A1P0DJD3 496 aaKnown RBP12.57□□□□□ -0.4
LHX3-203ENST00000619587 RBMY1CP0DJD4 496 aa12.57□□□□□ -0.4
LHX3-203ENST00000619587 RBMY1FQ15415 496 aaKnown RBP12.57□□□□□ -0.4
LHX3-203ENST00000619587 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.57□□□□□ -0.4
LHX3-203ENST00000619587 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
LHX3-203ENST00000619587 UBE2D4Q9Y2X8 147 aa12.57□□□□□ -0.4
LHX3-203ENST00000619587 IGHV4-38-2P0DP08 117 aa12.57□□□□□ -0.4
LHX3-203ENST00000619587 Q6ZSN1 163 aa12.57□□□□□ -0.4
LHX3-203ENST00000619587 H3BUA1 57 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
LHX3-203ENST00000619587 Q8N2B8 174 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 SPG11Q96JI7 2443 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 IGHV3-38A0A0C4DH36 116 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 IGLV1-40P01703 118 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
LHX3-203ENST00000619587 SMIM9A6NGZ8 99 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 A0A1B0GX51 115 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 COX7CP15954 63 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 MUC6Q6W4X9 2439 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 K7EMT4 169 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
LHX3-203ENST00000619587 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
LHX3-203ENST00000619587 TIMM17BO60830 172 aa12.54□□□□□ -0.4
LHX3-203ENST00000619587 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
LHX3-203ENST00000619587 DAZ4Q86SG3 579 aaKnown RBP12.54□□□□□ -0.4
LHX3-203ENST00000619587 DAZ3Q9NR90 486 aaKnown RBP12.54□□□□□ -0.4
LHX3-203ENST00000619587 COX7A2LO14548 114 aa12.54□□□□□ -0.4
LHX3-203ENST00000619587 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
LHX3-203ENST00000619587 K7EQG2 157 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 NDUFA1O15239 70 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 CXCL5P42830 114 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 GAGE2AQ6NT46 116 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 C5orf38Q86SI9 138 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 K7ENP7 123 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 COX6A2Q02221 97 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 SOSTDC1Q6X4U4 206 aa12.53□□□□□ -0.4
LHX3-203ENST00000619587 A6NDX4 124 aa12.52□□□□□ -0.41
LHX3-203ENST00000619587 SDIM1Q6ZPB5 146 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms