RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 BAGE3Q86Y29 109 aa6.42□□□□□ -1.38
SYN3-213ENST00000619146 RPL39LQ96EH5 51 aaKnown RBP6.42□□□□□ -1.38
SYN3-213ENST00000619146 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
SYN3-213ENST00000619146 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 TRAV26-1A0A087WT03 109 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 K7EMI3 77 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 TCAPO15273 167 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 TNP2Q05952 138 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 DAZ4Q86SG3 579 aaKnown RBP6.41□□□□□ -1.38
SYN3-213ENST00000619146 NEXN-AS1Q8NBZ9 246 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 C18orf32Q8TCD1 76 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 TMEM70Q9BUB7 260 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 SMIM2Q9BVW6 85 aa6.41□□□□□ -1.38
SYN3-213ENST00000619146 DAZ3Q9NR90 486 aaKnown RBP6.41□□□□□ -1.38
SYN3-213ENST00000619146 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 GAGE12JA6NER3 117 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 I3L3M4 83 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 S100A6P06703 90 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 GYPEP15421 78 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.38
SYN3-213ENST00000619146 GAGE1Q13065 139 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 GAGE4Q13068 117 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 GAGE5Q13069 117 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 MRPL23Q16540 153 aaKnown RBP6.4□□□□□ -1.38
SYN3-213ENST00000619146 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 COA6Q5JTJ3 125 aaKnown RBP6.4□□□□□ -1.38
SYN3-213ENST00000619146 C1orf134Q5TEV5 83 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 Q6ZR54 194 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 FA2HQ7L5A8 372 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 Q8N8P6 123 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 ZNRF2Q8NHG8 242 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 CHCHD1Q96BP2 118 aaKnown RBP6.4□□□□□ -1.38
SYN3-213ENST00000619146 VSIG2Q96IQ7 327 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 KIR2DL4Q99706 377 aa6.4□□□□□ -1.38
SYN3-213ENST00000619146 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
SYN3-213ENST00000619146 A0A0J9YY99 117 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 LINC00614P0C842 121 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 G0S2P27469 103 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 UBE2D3P61077 147 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 UBE2D2P62837 147 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 TMEM97Q5BJF2 176 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 ICOSQ9Y6W8 199 aa6.39□□□□□ -1.39
SYN3-213ENST00000619146 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 LINC01546A6NGU7 62 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 FCER1GP30273 86 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 IFI27P40305 119 aaPredicted RBP6.38□□□□□ -1.39
SYN3-213ENST00000619146 NDUFA6P56556 154 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 COTL1Q14019 142 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 IQCJQ1A5X6 159 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 RNASEKQ6P5S7 137 aaKnown RBP6.38□□□□□ -1.39
SYN3-213ENST00000619146 NIT1Q86X76 327 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 ATP6V0E2Q8NHE4 81 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 Q9UF83 564 aa6.38□□□□□ -1.39
SYN3-213ENST00000619146 TMA7Q9Y2S6 64 aaKnown RBP6.38□□□□□ -1.39
SYN3-213ENST00000619146 HSBP1O75506 76 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 SERF1AO75920 110 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 LAGE3Q14657 143 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 ORMDL2Q53FV1 153 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 NEGR1Q7Z3B1 354 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 Q8N1X5 172 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 C15orf53Q8NAA6 179 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 GTSF1LQ9H1H1 148 aa6.37□□□□□ -1.39
SYN3-213ENST00000619146 LINC01549A6NIU2 74 aa6.36□□□□□ -1.39
SYN3-213ENST00000619146 A0A096LPF7 62 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 IGHV3-38A0A0C4DH36 116 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 NUDT3O95989 172 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 TSHBP01222 138 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 ESDP10768 282 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 TIRAPP58753 221 aa6.35□□□□□ -1.39
SYN3-213ENST00000619146 TRBV6-8A0A0A6YYG3 113 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 AMTP48728 403 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 SMAGPQ0VAQ4 97 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 TMEM18Q96B42 140 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.39
SYN3-213ENST00000619146 TMEM243Q9BU79 118 aa6.34□□□□□ -1.39
SYN3-213ENST00000619146 TRBV25-1A0A075B6N4 114 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 H7C423 109 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 HBDP02042 147 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 S100A2P29034 98 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.4
SYN3-213ENST00000619146 LINC00310P59036 64 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 CYSLTR1Q9Y271 337 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
SYN3-213ENST00000619146 NUPR1O60356 82 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
SYN3-213ENST00000619146 PKIAP61925 76 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
SYN3-213ENST00000619146 LELP1Q5T871 98 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 LYPD5Q6UWN5 251 aa6.32□□□□□ -1.4
SYN3-213ENST00000619146 NTM-AS1Q6ZSK4 140 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms