RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 RHODO00212 210 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 P0DMU3 169 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 FAM231AP0DMU4 169 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 FAM231CP0DMU5 169 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 C11orf68Q9H3H3 251 aaKnown RBP10.27□□□□□ -0.76
CNTNAP3B-215ENST00000619138 MUC4Q99102 2169 aa10.27□□□□□ -0.77
CNTNAP3B-215ENST00000619138 RHPN1-AS1Q9BWJ2 59 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 MDFICQ9P1T7 246 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGHV3-16A0A0C4DH30 117 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 DNAL4O96015 105 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 PRM2P04554 102 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 COX8CQ7Z4L0 72 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 YAE1D1Q9NRH1 226 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
CNTNAP3B-215ENST00000619138 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
CNTNAP3B-215ENST00000619138 SRSF2Q01130 221 aaKnown RBP10.25□□□□□ -0.77
CNTNAP3B-215ENST00000619138 KLK5Q9Y337 293 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-215ENST00000619138 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
CNTNAP3B-215ENST00000619138 GPHB5Q86YW7 130 aa10.25□□□□□ -0.77
CNTNAP3B-215ENST00000619138 PSMG3-AS1Q96PY0 264 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TNFRSF18Q9Y5U5 241 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGKV3D-7A0A0C4DH55 119 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 H3BUX3 64 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 OVOL1O14753 267 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 NPFFO15130 113 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 MSMBP08118 114 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 M0QXV9 152 aa10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGHV4-38-2P0DP08 117 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TMEM263Q8WUH6 116 aaKnown RBP10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 LOC107984640A0A0U1RRK4 108 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 PLA2G2AP14555 144 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 PROK1P58294 105 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 ICOSQ9Y6W8 199 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 A0A0J9YXY3 114 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
CNTNAP3B-215ENST00000619138 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TMEM190Q8WZ59 177 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TRBV10-2A0A0K0K1G8 114 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 B4DSR2 109 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 Q96MF0 132 aa10.21□□□□□ -0.77
CNTNAP3B-215ENST00000619138 MGAM2Q2M2H8 2515 aa10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 TRBV7-1A0A0A6YYK4 115 aa10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGKV2-29A2NJV5 120 aaPredicted RBP10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 LINC01619G3V211 115 aa10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.78
CNTNAP3B-215ENST00000619138 LEPROTO15243 131 aa10.2□□□□□ -0.78
CNTNAP3B-215ENST00000619138 OOSP1A8MZH6 123 aa10.2□□□□□ -0.78
CNTNAP3B-215ENST00000619138 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
CNTNAP3B-215ENST00000619138 MINOS1Q5TGZ0 78 aa10.2□□□□□ -0.78
CNTNAP3B-215ENST00000619138 MINOS1-NBL1R4GNA1 71 aa10.2□□□□□ -0.78
CNTNAP3B-215ENST00000619138 ODF3BA8MYP8 253 aa10.19□□□□□ -0.78
CNTNAP3B-215ENST00000619138 H7C423 109 aa10.19□□□□□ -0.78
CNTNAP3B-215ENST00000619138 NSUN5P1Q3KNT7 163 aa10.19□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGHV4-4A0A075B6R2 117 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 DEFB113Q30KQ7 82 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGHV1-69DA0A0B4J2H0 117 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 TMEM223A0PJW6 202 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 LGALS9O00182 355 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 DSCR9P59020 149 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 BLCAPP62952 87 aa10.18□□□□□ -0.78
CNTNAP3B-215ENST00000619138 Q9HAA7 133 aa10.17□□□□□ -0.78
CNTNAP3B-215ENST00000619138 C19orf54Q5BKX5 351 aa10.17□□□□□ -0.78
CNTNAP3B-215ENST00000619138 TIMM17AQ99595 171 aa10.17□□□□□ -0.78
CNTNAP3B-215ENST00000619138 I3L3M4 83 aa10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 LINC01356Q8N9X3 169 aa10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 UBR5O95071 2799 aaPredicted RBP10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 AVPP01185 164 aa10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 PRIMA1Q86XR5 153 aa10.16□□□□□ -0.78
CNTNAP3B-215ENST00000619138 Q9UF83 564 aa10.15□□□□□ -0.78
CNTNAP3B-215ENST00000619138 Q8N6K4 173 aa10.15□□□□□ -0.78
CNTNAP3B-215ENST00000619138 IGLV4-3A0A075B6K6 122 aa10.15□□□□□ -0.79
CNTNAP3B-215ENST00000619138 RHOHQ15669 191 aa10.15□□□□□ -0.79
CNTNAP3B-215ENST00000619138 NXPH4O95158 308 aa10.14□□□□□ -0.79
CNTNAP3B-215ENST00000619138 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
CNTNAP3B-215ENST00000619138 ZANQ9Y493 2812 aa10.14□□□□□ -0.79
CNTNAP3B-215ENST00000619138 A0A0B4J2C4 111 aa10.14□□□□□ -0.79
CNTNAP3B-215ENST00000619138 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
CNTNAP3B-215ENST00000619138 CSMD2Q7Z408 3487 aa10.13□□□□□ -0.79
CNTNAP3B-215ENST00000619138 LINC00315P59091 139 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms