RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
CNOT3-210ENST00000618939 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
CNOT3-210ENST00000618939 Q6ZUT4 128 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 FOXI1Q12951 378 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 CLPSL2Q6UWE3 100 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 C5orf38Q86SI9 138 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 A0A0J9YY99 117 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 TRBV6-5A0A0K0K1A5 114 aa10.36□□□□□ -0.75
CNOT3-210ENST00000618939 DCANP1Q8TF63 244 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
CNOT3-210ENST00000618939 ABCA12Q86UK0 2595 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 XCL1P47992 114 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 RBX1P62877 108 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 RPL32P62910 135 aaKnown RBP10.35□□□□□ -0.75
CNOT3-210ENST00000618939 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 AVPP01185 164 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 ZNF22P17026 224 aaPredicted RBP10.35□□□□□ -0.75
CNOT3-210ENST00000618939 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
CNOT3-210ENST00000618939 PTH2Q96A98 100 aa10.35□□□□□ -0.75
CNOT3-210ENST00000618939 APOC4P55056 127 aa10.34□□□□□ -0.75
CNOT3-210ENST00000618939 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
CNOT3-210ENST00000618939 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
CNOT3-210ENST00000618939 ANGP03950 147 aaKnown RBP10.34□□□□□ -0.75
CNOT3-210ENST00000618939 PSMG3-AS1Q96PY0 264 aa10.34□□□□□ -0.75
CNOT3-210ENST00000618939 A0A0J9YXY3 114 aa10.34□□□□□ -0.75
CNOT3-210ENST00000618939 DEFB114Q30KQ6 69 aa10.34□□□□□ -0.75
CNOT3-210ENST00000618939 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
CNOT3-210ENST00000618939 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
CNOT3-210ENST00000618939 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
CNOT3-210ENST00000618939 LRRK2Q5S007 2527 aa10.33□□□□□ -0.76
CNOT3-210ENST00000618939 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
CNOT3-210ENST00000618939 C15orf53Q8NAA6 179 aa10.32□□□□□ -0.76
CNOT3-210ENST00000618939 TCL1BO95988 128 aa10.32□□□□□ -0.76
CNOT3-210ENST00000618939 ZMAT4Q9H898 229 aa10.32□□□□□ -0.76
CNOT3-210ENST00000618939 GYPEP15421 78 aa10.32□□□□□ -0.76
CNOT3-210ENST00000618939 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 HIST1H4AP62805 103 aaKnown RBP10.31□□□□□ -0.76
CNOT3-210ENST00000618939 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 C9orf85Q96MD7 179 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 ZNF702PQ9H963 129 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 CRYGDP07320 174 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 PROK1P58294 105 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 Q6ZTI0 123 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 LRRC75A-AS1Q8N1F1 130 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 SOCS3O14543 225 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
CNOT3-210ENST00000618939 EDN2P20800 178 aa10.3□□□□□ -0.76
CNOT3-210ENST00000618939 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
CNOT3-210ENST00000618939 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
CNOT3-210ENST00000618939 SPANXB1Q9NS25 103 aaPredicted RBP10.3□□□□□ -0.76
CNOT3-210ENST00000618939 PRUNE2Q8WUY3 3088 aa10.3□□□□□ -0.76
CNOT3-210ENST00000618939 BAALC-AS2P0C853 105 aa10.3□□□□□ -0.76
CNOT3-210ENST00000618939 TRAV4A0A0B4J268 109 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 A0A0B4J2C4 111 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 CRYBA4P53673 196 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 MIAQ16674 131 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 CDKN2A-AS1Q9UH64 79 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 TSHBP01222 138 aa10.29□□□□□ -0.76
CNOT3-210ENST00000618939 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
CNOT3-210ENST00000618939 CFAP126Q5VTH2 177 aa10.28□□□□□ -0.76
CNOT3-210ENST00000618939 ZFYVE26Q68DK2 2539 aa10.28□□□□□ -0.76
CNOT3-210ENST00000618939 Q6ZSV7 163 aa10.28□□□□□ -0.76
CNOT3-210ENST00000618939 CLEC2BQ92478 149 aa10.28□□□□□ -0.76
CNOT3-210ENST00000618939 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.76
CNOT3-210ENST00000618939 PTPRBP23467 1997 aa10.27□□□□□ -0.77
CNOT3-210ENST00000618939 ZNF561-AS1K7EIQ3 104 aa10.27□□□□□ -0.77
CNOT3-210ENST00000618939 IGLV2-18A0A075B6J9 118 aa10.27□□□□□ -0.77
CNOT3-210ENST00000618939 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 H3BT86 120 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 BRI3O95415 125 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 POLQO75417 2590 aa10.26□□□□□ -0.77
CNOT3-210ENST00000618939 CRLF1O75462 422 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 C9orf66Q5T8R8 295 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 PRM2P04554 102 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
CNOT3-210ENST00000618939 IGLV10-54A0A075B6I4 117 aa10.24□□□□□ -0.77
CNOT3-210ENST00000618939 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
CNOT3-210ENST00000618939 TRIOO75962 3097 aa10.24□□□□□ -0.77
CNOT3-210ENST00000618939 IGHV3-33P01772 117 aa10.24□□□□□ -0.77
CNOT3-210ENST00000618939 UFSP1Q6NVU6 142 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 C3orf56Q8N813 242 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 H0YGX0 51 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 RS1O15537 224 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 HIST2H2BCQ6DN03 193 aa10.23□□□□□ -0.77
CNOT3-210ENST00000618939 ATP5G1P05496 136 aa10.22□□□□□ -0.77
CNOT3-210ENST00000618939 ACYP1P07311 99 aa10.22□□□□□ -0.77
CNOT3-210ENST00000618939 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
CNOT3-210ENST00000618939 COX7A2LO14548 114 aa10.22□□□□□ -0.77
CNOT3-210ENST00000618939 FN1P02751 2386 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms