RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TLX1NBP0CAT3 122 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 PYDC2Q56P42 97 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 Q6ZNX1 250 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 HIST1H2BAQ96A08 127 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 FMC1Q96HJ9 113 aa2.72□□□□□ -1.97
SNCA-213ENST00000618500 PSMG3Q9BT73 122 aaPredicted RBP2.72□□□□□ -1.97
SNCA-213ENST00000618500 NUPR1O60356 82 aa2.71□□□□□ -1.97
SNCA-213ENST00000618500 S100A9P06702 114 aaKnown RBP2.71□□□□□ -1.97
SNCA-213ENST00000618500 FHITP49789 147 aa2.71□□□□□ -1.97
SNCA-213ENST00000618500 LINC01547P58512 204 aaPredicted RBP2.71□□□□□ -1.97
SNCA-213ENST00000618500 GNG5P63218 68 aa2.71□□□□□ -1.97
SNCA-213ENST00000618500 ASB16-AS1Q495Z4 193 aa2.71□□□□□ -1.97
SNCA-213ENST00000618500 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
SNCA-213ENST00000618500 CENPXA8MT69 81 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 SH2D1AO60880 128 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 MBP02144 154 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 UBE2D1P51668 147 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 GAGE6Q13070 117 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 RPP21Q9H633 154 aaKnown RBP2.71□□□□□ -1.98
SNCA-213ENST00000618500 CXorf1O96002 111 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 LTAP01374 205 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 GCHFRP30047 84 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 CRIP1P50238 77 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 OR5A1Q8NGJ0 315 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 GFRA4Q9GZZ7 299 aa2.71□□□□□ -1.98
SNCA-213ENST00000618500 IGLV4-69A0A075B6H9 119 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 IGLV4-60A0A075B6I1 120 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 CCDC160A6NGH7 325 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 M0QY20 66 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 CYCSP99999 105 aaKnown RBP2.7□□□□□ -1.98
SNCA-213ENST00000618500 FP248Q71RG6 208 aaPredicted RBP2.7□□□□□ -1.98
SNCA-213ENST00000618500 SEC22CQ9BRL7 303 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 ZNF471Q9BX82 626 aaPredicted RBP2.7□□□□□ -1.98
SNCA-213ENST00000618500 G3V3Q6 166 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 PEX7O00628 323 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 NPSP0C0P6 89 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 ESDP10768 282 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 SYCNQ0VAF6 134 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 FAM74A4Q5TZK3 123 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 LYPD6BQ8NI32 183 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 AP1S3Q96PC3 154 aa2.7□□□□□ -1.98
SNCA-213ENST00000618500 IGKV2-24A0A0C4DH68 120 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 A0A1W2PPV4 95 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 PET100P0DJ07 73 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 ARL14EPLP0DKL9 152 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 CDC34P49427 236 aaPredicted RBP2.69□□□□□ -1.98
SNCA-213ENST00000618500 ZNF56Q15929 161 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 C1orf137Q5JT78 98 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 NUP35Q8NFH5 326 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 THAP6Q8TBB0 222 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 SCGB1C1Q8TD33 95 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 CHCHD10Q8WYQ3 142 aaPredicted RBP2.69□□□□□ -1.98
SNCA-213ENST00000618500 HYLS1Q96M11 299 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 A0A1W2PNN7 141 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.69□□□□□ -1.98
SNCA-213ENST00000618500 CRYGAP11844 174 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 TAGLN2P37802 199 aaKnown RBP2.69□□□□□ -1.98
SNCA-213ENST00000618500 CAMPP49913 170 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 SERF2P84101 59 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 MEF2BQ02080 365 aaPredicted RBP2.69□□□□□ -1.98
SNCA-213ENST00000618500 TRIQKQ629K1 86 aa2.69□□□□□ -1.98
SNCA-213ENST00000618500 APOMO95445 188 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 CLPSL2Q6UWE3 100 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 MRPL52Q86TS9 123 aaKnown RBP2.68□□□□□ -1.98
SNCA-213ENST00000618500 SCGB1D1O95968 90 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 S100A5P33763 92 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 LINC00242Q5T6M2 205 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 RASL11AQ6T310 242 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 CD164L2Q6UWJ8 174 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 OR10D4PQ8NGN7 298 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 H0YIZ8 118 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 M0R381 172 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 UBE2L6O14933 153 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 NOL3O60936 208 aaKnown RBP2.68□□□□□ -1.98
SNCA-213ENST00000618500 EIF3GO75821 320 aaKnown RBP eCLIP2.68□□□□□ -1.98
SNCA-213ENST00000618500 SULT1A2P50226 295 aa2.68□□□□□ -1.98
SNCA-213ENST00000618500 RPS20P60866 119 aaKnown RBP2.68□□□□□ -1.98
SNCA-213ENST00000618500 SDHCQ99643 169 aaPredicted RBP2.68□□□□□ -1.98
SNCA-213ENST00000618500 MRPL35Q9NZE8 188 aaKnown RBP2.68□□□□□ -1.98
SNCA-213ENST00000618500 HIGD2BQ4VC39 106 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 SMIM12Q96EX1 92 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 WFDC1Q9HC57 220 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 NIT2Q9NQR4 276 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 A4D1N5 150 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 IGLC6P0CF74 106 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 SMIM17P0DL12 118 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 C9orf116Q5BN46 136 aaPredicted RBP2.67□□□□□ -1.98
SNCA-213ENST00000618500 SUMO4Q6EEV6 95 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 ACTR3CQ9C0K3 210 aaPredicted RBP2.67□□□□□ -1.98
SNCA-213ENST00000618500 TNFSF18Q9UNG2 199 aa2.67□□□□□ -1.98
SNCA-213ENST00000618500 GAGE10A6NGK3 116 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 FAM74A7A6NL05 159 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 PRYO14603 147 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 ZNF861PO60384 105 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 COTL1Q14019 142 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 LINC00469Q8N7U9 141 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 OR10AG1Q8NH19 301 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 SGK494Q96LW2 274 aa2.66□□□□□ -1.98
SNCA-213ENST00000618500 CCDC32Q9BV29 185 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms