RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 COTL1Q14019 142 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 CLPSL2Q6UWE3 100 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-228ENST00000618469 FRZBQ92765 325 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
BRCA1-228ENST00000618469 AMTP48728 403 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 RAB14P61106 215 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 ENHOQ6UWT2 76 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 NUP35Q8NFH5 326 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 BAALCQ8WXS3 180 aa10.58□□□□□ -0.72
BRCA1-228ENST00000618469 Q5VSD8 79 aa10.57□□□□□ -0.72
BRCA1-228ENST00000618469 TMEM191AQ9H0A3 160 aa10.57□□□□□ -0.72
BRCA1-228ENST00000618469 NAT8BQ9UHF3 227 aa10.57□□□□□ -0.72
BRCA1-228ENST00000618469 UBE2L6O14933 153 aa10.56□□□□□ -0.72
BRCA1-228ENST00000618469 GCSHP23434 173 aa10.56□□□□□ -0.72
BRCA1-228ENST00000618469 IFITM2Q01629 132 aa10.56□□□□□ -0.72
BRCA1-228ENST00000618469 RIGQ13278 110 aa10.56□□□□□ -0.72
BRCA1-228ENST00000618469 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-228ENST00000618469 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
BRCA1-228ENST00000618469 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
BRCA1-228ENST00000618469 MIAQ16674 131 aa10.55□□□□□ -0.72
BRCA1-228ENST00000618469 AMN1Q8IY45 258 aa10.55□□□□□ -0.72
BRCA1-228ENST00000618469 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
BRCA1-228ENST00000618469 GAS8-AS1O95177 125 aa10.54□□□□□ -0.72
BRCA1-228ENST00000618469 APCSP02743 223 aa10.54□□□□□ -0.72
BRCA1-228ENST00000618469 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-228ENST00000618469 XGP55808 180 aa10.54□□□□□ -0.72
BRCA1-228ENST00000618469 RNF185Q96GF1 192 aa10.54□□□□□ -0.72
BRCA1-228ENST00000618469 PRR34Q9NV39 138 aa10.54□□□□□ -0.72
BRCA1-228ENST00000618469 FAT1Q14517 4588 aa10.53□□□□□ -0.72
BRCA1-228ENST00000618469 SMIM27A0A1W2PRY6 76 aa10.53□□□□□ -0.72
BRCA1-228ENST00000618469 NCR2O95944 276 aa10.53□□□□□ -0.72
BRCA1-228ENST00000618469 C20orf203Q8NBC4 194 aa10.53□□□□□ -0.72
BRCA1-228ENST00000618469 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
BRCA1-228ENST00000618469 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 RAB4AP20338 218 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.73
BRCA1-228ENST00000618469 REG3AQ06141 175 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 MYCBP2O75592 4640 aa10.52□□□□□ -0.73
BRCA1-228ENST00000618469 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
BRCA1-228ENST00000618469 SMKR1H3BMG3 65 aa10.51□□□□□ -0.73
BRCA1-228ENST00000618469 HAMPP81172 84 aa10.51□□□□□ -0.73
BRCA1-228ENST00000618469 CLLU1Q5K131 121 aa10.51□□□□□ -0.73
BRCA1-228ENST00000618469 IGLV10-54A0A075B6I4 117 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-228ENST00000618469 IGKV2-29A2NJV5 120 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-228ENST00000618469 I3L3M4 83 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 PMCHP20382 165 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 CAMPP49913 170 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 MRPL54Q6P161 138 aaKnown RBP10.5□□□□□ -0.73
BRCA1-228ENST00000618469 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 TMEM242Q9NWH2 141 aa10.5□□□□□ -0.73
BRCA1-228ENST00000618469 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
BRCA1-228ENST00000618469 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
BRCA1-228ENST00000618469 A0A1B0GW15 77 aa10.48□□□□□ -0.73
BRCA1-228ENST00000618469 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
BRCA1-228ENST00000618469 TSHBP01222 138 aa10.48□□□□□ -0.73
BRCA1-228ENST00000618469 C14orf177Q52M58 125 aa10.48□□□□□ -0.73
BRCA1-228ENST00000618469 RNASEKQ6P5S7 137 aaKnown RBP10.48□□□□□ -0.73
BRCA1-228ENST00000618469 FGF6P10767 208 aa10.47□□□□□ -0.73
BRCA1-228ENST00000618469 HBBP68871 147 aa10.47□□□□□ -0.73
BRCA1-228ENST00000618469 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-228ENST00000618469 MRPL51Q4U2R6 128 aaKnown RBP10.47□□□□□ -0.73
BRCA1-228ENST00000618469 FAM104BQ5XKR9 115 aa10.47□□□□□ -0.73
BRCA1-228ENST00000618469 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.73
BRCA1-228ENST00000618469 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 J3QL48 77 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 PPP1R2P9O14990 202 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 S100A8P05109 93 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
BRCA1-228ENST00000618469 LINC01620Q4KN68 170 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 NRACQ8N912 160 aa10.46□□□□□ -0.73
BRCA1-228ENST00000618469 TRAV8-4A0A0B4J246 113 aa10.45□□□□□ -0.74
BRCA1-228ENST00000618469 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
BRCA1-228ENST00000618469 A0A1B0GXF2 115 aa10.45□□□□□ -0.74
BRCA1-228ENST00000618469 H7C423 109 aa10.45□□□□□ -0.74
BRCA1-228ENST00000618469 PPP1R17O96001 155 aa10.45□□□□□ -0.74
BRCA1-228ENST00000618469 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
BRCA1-228ENST00000618469 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 F8W036 122 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 MT-ND4LP03901 98 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 ESDP10768 282 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 ZNF25P17030 456 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-228ENST00000618469 FCER1GP30273 86 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 CKS2P33552 79 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 ATP5L2Q7Z4Y8 100 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 BTF3L4Q96K17 158 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
BRCA1-228ENST00000618469 D6R8Y8 96 aa10.42□□□□□ -0.74
BRCA1-228ENST00000618469 VCYO14598 125 aa10.42□□□□□ -0.74
BRCA1-228ENST00000618469 ANAPC16Q96DE5 110 aa10.42□□□□□ -0.74
BRCA1-228ENST00000618469 TMEM101Q96IK0 257 aa10.42□□□□□ -0.74
BRCA1-228ENST00000618469 LINC00862A6NCI5 91 aa10.41□□□□□ -0.74
BRCA1-228ENST00000618469 PRSS1P07477 247 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms