RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
GPC6-202ENST00000617456 TRAV10A0A0B4J240 114 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 IGHV4-28A0A0C4DH34 117 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 NDUFC2-KCTD14E9PQ53 114 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 J3QQQ9 107 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 NDUFC2O95298 119 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 IL4P05112 153 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 TAS2R45P59539 299 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 Q6ZTC4 211 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 NFE4Q86UQ8 179 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 C10orf126Q8N4M7 172 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 RCL1Q9Y2P8 373 aaKnown RBP6.16□□□□□ -1.42
GPC6-202ENST00000617456 PYGO1Q9Y3Y4 419 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 ARL2-SNX15V9GYD0 113 aa6.16□□□□□ -1.42
GPC6-202ENST00000617456 TRAV4A0A0B4J268 109 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 GIG44P09565 113 aaPredicted RBP6.15□□□□□ -1.42
GPC6-202ENST00000617456 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
GPC6-202ENST00000617456 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 HLA-DRB4P13762 266 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
GPC6-202ENST00000617456 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
GPC6-202ENST00000617456 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 PQLC2Q6ZP29 291 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 Q8NAQ8 132 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 CSNK1G2-AS1Q8NCQ2 148 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 TRGV9Q99603 122 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 HLA-DRB4X5D2U9 266 aa6.15□□□□□ -1.42
GPC6-202ENST00000617456 PKD1P98161 4303 aa6.15□□□□□ -1.43
GPC6-202ENST00000617456 HSPG2P98160 4391 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 IGHV3-66A0A0C4DH42 116 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 FAM240AA0A1B0GVK7 77 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 ZFP92A6NM28 416 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 NXPH3O95157 252 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 CT83Q5H943 113 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 LYRM7Q5U5X0 104 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 THAP8Q8NA92 274 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 TIMM9Q9Y5J7 89 aa6.14□□□□□ -1.43
GPC6-202ENST00000617456 IGLV2-18A0A075B6J9 118 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 IGKV1D-37A0A075B6S9 117 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 DEFB131BA0A096LNP1 70 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 hDV102S1A0JD36 115 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 SNURFLB1AK76 121 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 H3BMM0 161 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 SYNGR2O43760 224 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 OXTP01178 125 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 COX7CP15954 63 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 PFN2P35080 140 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 EXOC3-AS1Q8N2X6 119 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 ANKRD29Q8N6D5 301 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 C15orf53Q8NAA6 179 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 C18orf15Q96N68 181 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 LAMTOR3Q9UHA4 124 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 AGRNO00468 2067 aa6.13□□□□□ -1.43
GPC6-202ENST00000617456 PRSS46E5RG02 174 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 CEND1Q8N111 149 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 TMEM147Q9BVK8 224 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 CELA1Q9UNI1 258 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 PKIGQ9Y2B9 76 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 X6R8D5 127 aa6.12□□□□□ -1.43
GPC6-202ENST00000617456 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 KNCNA6PVL3 124 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 A8MWL6 223 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 C9JCJ5 164 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 ZNF726P1Q15940 193 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 C12orf74Q32Q52 190 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 LGALS9BQ3B8N2 356 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 UBE2DNLQ8IWF7 75 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 TMEM252Q8N6L7 170 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 AGPAT4-IT1Q9H0P7 198 aa6.11□□□□□ -1.43
GPC6-202ENST00000617456 IGKV1OR2-108A0A075B7D4 117 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 FAM24AA6NFZ4 105 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 A8MTW9 85 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 SOCS3O14543 225 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 SSSCA1O60232 199 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 TRACP01848 142 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 GATA1P15976 413 aaPredicted RBP6.1□□□□□ -1.43
GPC6-202ENST00000617456 RPL13AP40429 203 aaKnown RBP6.1□□□□□ -1.43
GPC6-202ENST00000617456 ARL16Q0P5N6 197 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 FAM19A2Q8N3H0 131 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 MAPKAPK5-AS1Q8N8E1 139 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 KCNIP2Q9NS61 270 aa6.1□□□□□ -1.43
GPC6-202ENST00000617456 CTXND1A0A1B0GTU2 59 aa6.09□□□□□ -1.43
GPC6-202ENST00000617456 C16orf90A8MZG2 172 aa6.09□□□□□ -1.43
GPC6-202ENST00000617456 CSN1S1P47710 185 aa6.09□□□□□ -1.43
GPC6-202ENST00000617456 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
GPC6-202ENST00000617456 AP5S1Q9NUS5 200 aa6.09□□□□□ -1.43
GPC6-202ENST00000617456 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 A0A0J9YX75 114 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 RBAKDNA6NC62 111 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 A8MWV9 139 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 LEPROTL1O95214 131 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
GPC6-202ENST00000617456 IAPPP10997 89 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms