RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
PCDHGC3-204ENST00000617222 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
PCDHGC3-204ENST00000617222 AMTP48728 403 aa10.65□□□□□ -0.7
PCDHGC3-204ENST00000617222 KIR2DL4Q99706 377 aa10.65□□□□□ -0.7
PCDHGC3-204ENST00000617222 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
PCDHGC3-204ENST00000617222 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.71
PCDHGC3-204ENST00000617222 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
PCDHGC3-204ENST00000617222 FCER1GP30273 86 aa10.64□□□□□ -0.71
PCDHGC3-204ENST00000617222 GAGE6Q13070 117 aa10.64□□□□□ -0.71
PCDHGC3-204ENST00000617222 M0R2N4 97 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 TRGC2P03986 189 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 DNAH10OSP0CZ25 163 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 NIT1Q86X76 327 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 Q8N8P6 123 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
PCDHGC3-204ENST00000617222 TCAPO15273 167 aa10.62□□□□□ -0.71
PCDHGC3-204ENST00000617222 Q8N3U1 123 aa10.62□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 NBDYA0A0U1RRE5 68 aa10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 IGKV2-29A2NJV5 120 aaPredicted RBP10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 UBE2L6O14933 153 aa10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 ESDP10768 282 aa10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 LINC01556Q5JQF7 62 aa10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
PCDHGC3-204ENST00000617222 A0A087WX48 190 aa10.6□□□□□ -0.71
PCDHGC3-204ENST00000617222 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
PCDHGC3-204ENST00000617222 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
PCDHGC3-204ENST00000617222 PKIAP61925 76 aa10.59□□□□□ -0.71
PCDHGC3-204ENST00000617222 MPV17L2Q567V2 206 aa10.59□□□□□ -0.71
PCDHGC3-204ENST00000617222 C18orf32Q8TCD1 76 aa10.59□□□□□ -0.71
PCDHGC3-204ENST00000617222 LYSTQ99698 3801 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 RBX1P62877 108 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 TTC32Q5I0X7 151 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 Q6ZR54 194 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
PCDHGC3-204ENST00000617222 H7C423 109 aa10.57□□□□□ -0.72
PCDHGC3-204ENST00000617222 LAGE3Q14657 143 aa10.57□□□□□ -0.72
PCDHGC3-204ENST00000617222 AMMECR1LQ6DCA0 310 aa10.57□□□□□ -0.72
PCDHGC3-204ENST00000617222 Q8N976 141 aa10.57□□□□□ -0.72
PCDHGC3-204ENST00000617222 C20orf203Q8NBC4 194 aa10.57□□□□□ -0.72
PCDHGC3-204ENST00000617222 FGF6P10767 208 aa10.56□□□□□ -0.72
PCDHGC3-204ENST00000617222 RNASEKQ6P5S7 137 aaKnown RBP10.56□□□□□ -0.72
PCDHGC3-204ENST00000617222 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
PCDHGC3-204ENST00000617222 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
PCDHGC3-204ENST00000617222 KLK12Q9UKR0 248 aa10.56□□□□□ -0.72
PCDHGC3-204ENST00000617222 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 A0A1B0GUV1 79 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 K7EMI3 77 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 K7EP13 123 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 ORMDL2Q53FV1 153 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 TMEM18Q96B42 140 aa10.55□□□□□ -0.72
PCDHGC3-204ENST00000617222 IBA57-AS1B1ANH7 110 aa10.54□□□□□ -0.72
PCDHGC3-204ENST00000617222 ANGP03950 147 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-204ENST00000617222 LINC00614P0C842 121 aa10.54□□□□□ -0.72
PCDHGC3-204ENST00000617222 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
PCDHGC3-204ENST00000617222 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
PCDHGC3-204ENST00000617222 URB1-AS1Q96HZ7 61 aa10.53□□□□□ -0.72
PCDHGC3-204ENST00000617222 KMT2CQ8NEZ4 4911 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 RAB5BP61020 215 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 DGAT2L7PQ6IED9 249 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 UBE2WQ96B02 151 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 UBE2D4Q9Y2X8 147 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 DNAH6Q9C0G6 4158 aa10.52□□□□□ -0.73
PCDHGC3-204ENST00000617222 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 Q0VG73 95 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 C2orf66Q6UXQ4 117 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 Q9HAA7 133 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
PCDHGC3-204ENST00000617222 G0S2P27469 103 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 CLPSL2Q6UWE3 100 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 ENHOQ6UWT2 76 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 TIMM21Q9BVV7 248 aa10.5□□□□□ -0.73
PCDHGC3-204ENST00000617222 CRPP02741 224 aa10.49□□□□□ -0.73
PCDHGC3-204ENST00000617222 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
PCDHGC3-204ENST00000617222 SPANXA1Q9NS26 97 aa10.49□□□□□ -0.73
PCDHGC3-204ENST00000617222 CSDC2Q9Y534 153 aaKnown RBP10.49□□□□□ -0.73
PCDHGC3-204ENST00000617222 HYDINQ4G0P3 5121 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 IGKV3OR2-268A0A0C4DH90 116 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 344.4 ms