RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CIRBP-AS1Q8TBR5 109 aa6.29□□□□□ -1.4
TARDBP-218ENST00000617172 A8MWL6 223 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 K7EN84 100 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 PRSS1P07477 247 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 KRTAP26-1Q6PEX3 210 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 C9orf163Q8N9P6 203 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
TARDBP-218ENST00000617172 RNASE7Q9H1E1 156 aaKnown RBP6.28□□□□□ -1.4
TARDBP-218ENST00000617172 A6NJY4 79 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 GATCO43716 136 aaKnown RBP6.27□□□□□ -1.41
TARDBP-218ENST00000617172 NDUFS6O75380 124 aaKnown RBP6.27□□□□□ -1.41
TARDBP-218ENST00000617172 NCR2O95944 276 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 AMTP48728 403 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 ALKAL2Q6UX46 152 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 FAM231DQ6ZW35 169 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 GATD1Q8NB37 220 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 FAM210AQ96ND0 272 aa6.27□□□□□ -1.41
TARDBP-218ENST00000617172 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
TARDBP-218ENST00000617172 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 H7C423 109 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 LCE2BO14633 110 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 FOXA3P55318 350 aaPredicted RBP6.26□□□□□ -1.41
TARDBP-218ENST00000617172 CT83Q5H943 113 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 CFAP161Q6P656 301 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 GTSF1Q8WW33 167 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 BORCS7Q96B45 105 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
TARDBP-218ENST00000617172 IGLV10-54A0A075B6I4 117 aa6.25□□□□□ -1.41
TARDBP-218ENST00000617172 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.25□□□□□ -1.41
TARDBP-218ENST00000617172 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
TARDBP-218ENST00000617172 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
TARDBP-218ENST00000617172 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
TARDBP-218ENST00000617172 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
TARDBP-218ENST00000617172 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 hDV102S1A0JD36 115 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 FAM231BA6NCW3 169 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 CEBPGP53567 150 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 AMMECR1LQ6DCA0 310 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 GFRA4Q9GZZ7 299 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 MYCBP2O75592 4640 aa6.24□□□□□ -1.41
TARDBP-218ENST00000617172 HERC1Q15751 4861 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 TRBV6-5A0A0K0K1A5 114 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 A0A1B0GUT8 65 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 I3L3M4 83 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 APCSP02743 223 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 PMCHP20382 165 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 TSKUQ8WUA8 353 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 SMIM7Q9BQ49 75 aa6.23□□□□□ -1.41
TARDBP-218ENST00000617172 hCG_2014768A0A024R1R8 64 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 ZNF727A8MUV8 499 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 OXTP01178 125 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 ZNF25P17030 456 aaPredicted RBP6.22□□□□□ -1.41
TARDBP-218ENST00000617172 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
TARDBP-218ENST00000617172 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
TARDBP-218ENST00000617172 LINC01551Q86U37 167 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 RPL39LQ96EH5 51 aaKnown RBP6.22□□□□□ -1.41
TARDBP-218ENST00000617172 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 RNF185Q96GF1 192 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 BTF3L4Q96K17 158 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 TMEM191AQ9H0A3 160 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 OSTCQ9NRP0 149 aa6.22□□□□□ -1.41
TARDBP-218ENST00000617172 VPS13BQ7Z7G8 4022 aa6.21□□□□□ -1.42
TARDBP-218ENST00000617172 GAGE12HA6NDE8 117 aa6.21□□□□□ -1.42
TARDBP-218ENST00000617172 HIGD1CA8MV81 97 aa6.21□□□□□ -1.42
TARDBP-218ENST00000617172 FGF6P10767 208 aa6.21□□□□□ -1.42
TARDBP-218ENST00000617172 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
TARDBP-218ENST00000617172 TMEM101Q96IK0 257 aa6.21□□□□□ -1.42
TARDBP-218ENST00000617172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.21□□□□□ -1.42
TARDBP-218ENST00000617172 PPP1R17O96001 155 aa6.2□□□□□ -1.42
TARDBP-218ENST00000617172 RPS10P46783 165 aaKnown RBP6.2□□□□□ -1.42
TARDBP-218ENST00000617172 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
TARDBP-218ENST00000617172 FAM74A3Q4VXF1 159 aa6.2□□□□□ -1.42
TARDBP-218ENST00000617172 CHCHD10Q8WYQ3 142 aaPredicted RBP6.2□□□□□ -1.42
TARDBP-218ENST00000617172 MRAP2Q96G30 205 aa6.2□□□□□ -1.42
TARDBP-218ENST00000617172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.19□□□□□ -1.42
TARDBP-218ENST00000617172 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 IGKV2-29A2NJV5 120 aaPredicted RBP6.19□□□□□ -1.42
TARDBP-218ENST00000617172 SLPIP03973 132 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
TARDBP-218ENST00000617172 RAB4AP20338 218 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
TARDBP-218ENST00000617172 RIGQ13278 110 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 TMEM241Q24JQ0 296 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 OR5A1Q8NGJ0 315 aa6.19□□□□□ -1.42
TARDBP-218ENST00000617172 VCYO14598 125 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 ESDP10768 282 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 SMAGPQ0VAQ4 97 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
TARDBP-218ENST00000617172 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 SMDT1Q9H4I9 107 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 NAT8BQ9UHF3 227 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 PKIGQ9Y2B9 76 aa6.18□□□□□ -1.42
TARDBP-218ENST00000617172 GVQW2A0A096LPI5 108 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms